AT5G12470

Description : Protein of unknown function (DUF3411)

Gene families : OG0001331 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001331_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G12470

Target	Alias	Description	ECC score	Gene Family Method
Aev_g02433	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Als_g34117	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Cba_g03217	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.13G039500.1	Ceric.13G039500	not classified & original description: pacid=50635975...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000863.14	No alias	Protein RETICULATA-RELATED 4, chloroplastic...	0.01	OrthoFinder output from all 47 species
Dac_g18040	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Dcu_g05548	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g22985	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
LOC_Os01g61120.1	LOC_Os01g61120	Protein RETICULATA-RELATED 6, chloroplastic...	0.01	OrthoFinder output from all 47 species
Mp2g08400.1	No alias	Protein RETICULATA-RELATED 4, chloroplastic...	0.05	OrthoFinder output from all 47 species
Msp_g12361	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g20912	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g37256	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g09022	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Tin_g13626	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	IDA	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009526	plastid envelope	None	Extended
CC	GO:0009528	plastid inner membrane	None	Extended
CC	GO:0009536	plastid	IDA	Interproscan
CC	GO:0009706	chloroplast inner membrane	IDA	Interproscan
CC	GO:0009941	chloroplast envelope	IDA	Interproscan
CC	GO:0016020	membrane	None	Extended
CC	GO:0019866	organelle inner membrane	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031969	chloroplast membrane	None	Extended
CC	GO:0031975	envelope	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR021825	RETICULATA-related	160	337

External Links

No external refs found!

AT5G12470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation