AT5G12330 (LRP1)

Aliases : LRP1

Description : Lateral root primordium (LRP) protein-related

Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G12330

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00063p00161200	LRP1,...	RNA biosynthesis.transcriptional activation.SRS...	0.06	OrthoFinder output from all 47 species
Adi_g045239	SRS7	SRS-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Adi_g045684	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g058361	SHI	SRS-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058362	SHI	SRS-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Adi_g061023	SHI	SRS-type transcription factor & original description: none	0.1	OrthoFinder output from all 47 species
Adi_g069569	LRP1	SRS-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g077130	SRS1, STY1	SRS-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Adi_g079599	SRS1, STY1	SRS-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Adi_g079607	No alias	not classified & original description: none	0.09	OrthoFinder output from all 47 species
Adi_g085909	SRS1, STY1	SRS-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Adi_g106034	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aev_g17440	SHI	SRS-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g21092	LRP1	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g24739	SHI	SRS-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g26536	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g27015	SRS1, STY1	SRS-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g07658	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g32553	SHI	SRS-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene65745.t1	SHI, Aspi01Gene65745	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.14G028100.1	SRS1, STY1,...	SRS-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.25G035200.1	SRS1, STY1,...	SRS-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.32G058400.1	SRS1, STY1,...	SRS-type transcription factor & original description:...	0.07	OrthoFinder output from all 47 species
Dac_g13440	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g08256	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13643	LRP1	SRS-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g40676	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g02264	SHI	SRS-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01009812001	SRS5	RNA biosynthesis.transcriptional activation.SRS...	0.06	OrthoFinder output from all 47 species
GSVIVT01024206001	SHI	RNA biosynthesis.transcriptional activation.SRS...	0.03	OrthoFinder output from all 47 species
LOC_Os01g72490.1	LRP1, LOC_Os01g72490	transcription factor (SRS)	0.07	OrthoFinder output from all 47 species
LOC_Os05g32070.1	LRP1, LOC_Os05g32070	transcription factor (SRS)	0.07	OrthoFinder output from all 47 species
LOC_Os06g49830.1	SRS1, STY1,...	transcription factor (SRS)	0.06	OrthoFinder output from all 47 species
LOC_Os08g43410.1	SRS1, STY1,...	transcription factor (SRS)	0.06	OrthoFinder output from all 47 species
LOC_Os09g36160.1	SRS1, STY1,...	transcription factor (SRS)	0.06	OrthoFinder output from all 47 species
Len_g31120	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_2299g0010	LRP1	transcription factor (SRS)	0.05	OrthoFinder output from all 47 species
Msp_g32313	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g32314	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g26494	SHI	SRS-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g19370	SRS1, STY1	SRS-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g48067	LRP1	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g16685	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59296	SHI	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968	SHI	SRS-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023316	SRS1, STY1	not classified & original description: CDS=12-590	0.05	OrthoFinder output from all 47 species
Solyc11g064800.3.1	LRP1, Solyc11g064800	transcription factor (SRS)	0.04	OrthoFinder output from all 47 species
Tin_g29778	SRS1, STY1	SRS-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e004006_P001	SHI, Zm00001e004006	transcription factor (SRS)	0.05	OrthoFinder output from all 47 species
Zm00001e010227_P001	SRS1, STY1,...	transcription factor (SRS)	0.06	OrthoFinder output from all 47 species
Zm00001e013256_P002	SHI, Zm00001e013256	transcription factor (SRS)	0.05	OrthoFinder output from all 47 species
Zm00001e024681_P001	SHI, Zm00001e024681	transcription factor (SRS)	0.03	OrthoFinder output from all 47 species
Zm00001e026854_P001	SHI, Zm00001e026854	transcription factor (SRS)	0.07	OrthoFinder output from all 47 species
Zm00001e028304_P001	LRP1, Zm00001e028304	transcription factor (SRS)	0.08	OrthoFinder output from all 47 species
Zm00001e030189_P001	SHI, Zm00001e030189	transcription factor (SRS)	0.06	OrthoFinder output from all 47 species
Zm00001e031567_P001	LRP1, Zm00001e031567	transcription factor (SRS)	0.08	OrthoFinder output from all 47 species
Zm00001e034798_P001	SRS1, STY1,...	transcription factor (SRS)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000902	cell morphogenesis	None	Extended
BP	GO:0000904	cell morphogenesis involved in differentiation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	ND	Interproscan
BP	GO:0007015	actin filament organization	None	Extended
BP	GO:0007155	cell adhesion	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IEP	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010053	root epidermal cell differentiation	None	Extended
BP	GO:0010090	trichome morphogenesis	RCA	Interproscan
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0021700	developmental maturation	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042802	identical protein binding	None	Extended
MF	GO:0042803	protein homodimerization activity	IPI	Interproscan
BP	GO:0045010	actin nucleation	RCA	Interproscan
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0046983	protein dimerization activity	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048469	cell maturation	None	Extended
BP	GO:0048764	trichoblast maturation	None	Extended
BP	GO:0048765	root hair cell differentiation	RCA	Interproscan
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	RCA	Interproscan
BP	GO:0071695	anatomical structure maturation	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090627	plant epidermal cell differentiation	None	Extended
BP	GO:0097435	supramolecular fiber organization	None	Extended
BP	GO:0099402	plant organ development	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0009687	abscisic acid metabolic process	IEP	HCCA
BP	GO:0009688	abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0009736	cytokinin-activated signaling pathway	IEP	HCCA
BP	GO:0009740	gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009799	specification of symmetry	IEP	HCCA
BP	GO:0009823	cytokinin catabolic process	IEP	HCCA
BP	GO:0009855	determination of bilateral symmetry	IEP	HCCA
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	HCCA
BP	GO:0009944	polarity specification of adaxial/abaxial axis	IEP	HCCA
BP	GO:0009968	negative regulation of signal transduction	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010016	shoot system morphogenesis	IEP	HCCA
BP	GO:0010075	regulation of meristem growth	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010162	seed dormancy process	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
MF	GO:0010279	indole-3-acetic acid amido synthetase activity	IEP	HCCA
MF	GO:0010436	carotenoid dioxygenase activity	IEP	HCCA
BP	GO:0010476	gibberellin mediated signaling pathway	IEP	HCCA
BP	GO:0010648	negative regulation of cell communication	IEP	HCCA
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016881	acid-amino acid ligase activity	IEP	HCCA
MF	GO:0019139	cytokinin dehydrogenase activity	IEP	HCCA
BP	GO:0022611	dormancy process	IEP	HCCA
BP	GO:0023057	negative regulation of signaling	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
BP	GO:0040008	regulation of growth	IEP	HCCA
BP	GO:0042447	hormone catabolic process	IEP	HCCA
BP	GO:0042592	homeostatic process	IEP	HCCA
BP	GO:0043288	apocarotenoid metabolic process	IEP	HCCA
BP	GO:0043289	apocarotenoid biosynthetic process	IEP	HCCA
MF	GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	IEP	HCCA
BP	GO:0048439	flower morphogenesis	IEP	HCCA
BP	GO:0048479	style development	IEP	HCCA
BP	GO:0048480	stigma development	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
BP	GO:0048638	regulation of developmental growth	IEP	HCCA
BP	GO:0048878	chemical homeostasis	IEP	HCCA
BP	GO:0065001	specification of axis polarity	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	HCCA
BP	GO:1902644	tertiary alcohol metabolic process	IEP	HCCA
BP	GO:1902645	tertiary alcohol biosynthetic process	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT5G12330 (LRP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation