AT5G12330 (LRP1)


Aliases : LRP1

Description : Lateral root primordium (LRP) protein-related


Gene families : OG0001235 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001235_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G12330

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00063p00161200 LRP1,... RNA biosynthesis.transcriptional activation.SRS... 0.06 OrthoFinder output from all 47 species
Adi_g045239 SRS7 SRS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g045684 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058361 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g058362 SHI SRS-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g061023 SHI SRS-type transcription factor & original description: none 0.1 OrthoFinder output from all 47 species
Adi_g069569 LRP1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g077130 SRS1, STY1 SRS-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g079599 SRS1, STY1 SRS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g079607 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Adi_g085909 SRS1, STY1 SRS-type transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g106034 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g17440 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21092 LRP1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24739 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26536 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27015 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g07658 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g32553 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65745.t1 SHI, Aspi01Gene65745 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G028100.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.25G035200.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.32G058400.1 SRS1, STY1,... SRS-type transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g13440 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08256 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13643 LRP1 SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40676 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02264 SHI SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009812001 SRS5 RNA biosynthesis.transcriptional activation.SRS... 0.06 OrthoFinder output from all 47 species
GSVIVT01024206001 SHI RNA biosynthesis.transcriptional activation.SRS... 0.03 OrthoFinder output from all 47 species
LOC_Os01g72490.1 LRP1, LOC_Os01g72490 transcription factor (SRS) 0.07 OrthoFinder output from all 47 species
LOC_Os05g32070.1 LRP1, LOC_Os05g32070 transcription factor (SRS) 0.07 OrthoFinder output from all 47 species
LOC_Os06g49830.1 SRS1, STY1,... transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
LOC_Os08g43410.1 SRS1, STY1,... transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
LOC_Os09g36160.1 SRS1, STY1,... transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
Len_g31120 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_2299g0010 LRP1 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Msp_g32313 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26494 SHI SRS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19370 SRS1, STY1 SRS-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g48067 LRP1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16685 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59296 SHI SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013968 SHI SRS-type transcription factor & original description:... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023316 SRS1, STY1 not classified & original description: CDS=12-590 0.05 OrthoFinder output from all 47 species
Solyc11g064800.3.1 LRP1, Solyc11g064800 transcription factor (SRS) 0.04 OrthoFinder output from all 47 species
Tin_g29778 SRS1, STY1 SRS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004006_P001 SHI, Zm00001e004006 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Zm00001e010227_P001 SRS1, STY1,... transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
Zm00001e013256_P002 SHI, Zm00001e013256 transcription factor (SRS) 0.05 OrthoFinder output from all 47 species
Zm00001e024681_P001 SHI, Zm00001e024681 transcription factor (SRS) 0.03 OrthoFinder output from all 47 species
Zm00001e026854_P001 SHI, Zm00001e026854 transcription factor (SRS) 0.07 OrthoFinder output from all 47 species
Zm00001e028304_P001 LRP1, Zm00001e028304 transcription factor (SRS) 0.08 OrthoFinder output from all 47 species
Zm00001e030189_P001 SHI, Zm00001e030189 transcription factor (SRS) 0.06 OrthoFinder output from all 47 species
Zm00001e031567_P001 LRP1, Zm00001e031567 transcription factor (SRS) 0.08 OrthoFinder output from all 47 species
Zm00001e034798_P001 SRS1, STY1,... transcription factor (SRS) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component ND Interproscan
BP GO:0007155 cell adhesion RCA Interproscan
BP GO:0009733 response to auxin IEP Interproscan
BP GO:0010090 trichome morphogenesis RCA Interproscan
MF GO:0042803 protein homodimerization activity IPI Interproscan
BP GO:0045010 actin nucleation RCA Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048765 root hair cell differentiation RCA Interproscan
BP GO:0071555 cell wall organization RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009736 cytokinin-activated signaling pathway IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009823 cytokinin catabolic process IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009968 negative regulation of signal transduction IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP HCCA
MF GO:0010436 carotenoid dioxygenase activity IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010648 negative regulation of cell communication IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0019139 cytokinin dehydrogenase activity IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0023057 negative regulation of signaling IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0042447 hormone catabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048480 stigma development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!