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  5. AT5G11980

AT5G11980


Description : conserved oligomeric Golgi complex component-related / COG complex component-related


Gene families : OG0005883 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005883_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G11980

Target Alias Description ECC score Gene Family Method Actions
Adi_g114251 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.06 OrthoFinder output from all 47 species
Als_g16622 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Aop_g01807 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007595 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Cre10.g439650 No alias Vesicle trafficking.target membrane tethering.COG... 0.02 OrthoFinder output from all 47 species
Dcu_g06307 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
Gb_37671 No alias component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.07 OrthoFinder output from all 47 species
LOC_Os12g35290.1 LOC_Os12g35290 component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.1 OrthoFinder output from all 47 species
Lfl_g01731 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.05 OrthoFinder output from all 47 species
MA_341112g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp4g05520.1 No alias component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.05 OrthoFinder output from all 47 species
Nbi_g05801 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.02 OrthoFinder output from all 47 species
Ore_g17416 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Pir_g02283 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020550 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.04 OrthoFinder output from all 47 species
Sam_g19253 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Smo438656 No alias Vesicle trafficking.target membrane tethering.COG... 0.04 OrthoFinder output from all 47 species
Solyc01g087650.4.1 Solyc01g087650 component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.04 OrthoFinder output from all 47 species
Spa_g00463 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.09 OrthoFinder output from all 47 species
Tin_g04642 No alias component *(COG8) of COG (Conserved-Oligomeric Golgi)... 0.03 OrthoFinder output from all 47 species
Zm00001e000680_P001 Zm00001e000680 component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.08 OrthoFinder output from all 47 species
Zm00001e038824_P001 Zm00001e038824 component COG8 of COG (Conserved-Oligomeric Golgi) complex 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005797 Golgi medial cisterna IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006498 N-terminal protein lipidation IEP HCCA
BP GO:0006499 N-terminal protein myristoylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009910 negative regulation of flower development IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
MF GO:0016004 phospholipase activator activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0018377 protein myristoylation IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030276 clathrin binding IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031365 N-terminal protein amino acid modification IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
CC GO:0031985 Golgi cisterna IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043543 protein acylation IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0052546 cell wall pectin metabolic process IEP HCCA
MF GO:0060229 lipase activator activity IEP HCCA
BP GO:0080119 ER body organization IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
BP GO:2000242 negative regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR007255 COG8 29 362
No external refs found!