AT5G11620

Description : SWIM zinc finger family protein / mitogen-activated protein kinase kinase kinase (MAPKKK)-related

Gene families : OG0007227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007227_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G11620
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00099260	evm_27.TU.AmTr_v1...	No description available	0.04	OrthoFinder output from all 47 species
Ore_g40680	No alias	E3 ubiquitin ligase *(MEL) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc08g066550.3.1	Solyc08g066550	no hits & (original description: none)	0.25	OrthoFinder output from all 47 species
Zm00001e037240_P001	Zm00001e037240	no hits & (original description: none)	0.16	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0016020	membrane	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	59	87

External Links

No external refs found!