1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G11470

AT5G11470


Description : bromo-adjacent homology (BAH) domain-containing protein


Gene families : OG0002301 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002301_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G11470

Target Alias Description ECC score Gene Family Method Actions
Adi_g021709 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.03 OrthoFinder output from all 47 species
Aspi01Gene12263.t1 Aspi01Gene12263 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34062 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Gb_32410 No alias chromatin-associated epigenetic factor 0.02 OrthoFinder output from all 47 species
MA_11827g0010 No alias chromatin-associated epigenetic factor 0.03 OrthoFinder output from all 47 species
Ore_g26460 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002462 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.03 OrthoFinder output from all 47 species
Sam_g29064 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromatin silencing... 0.02 OrthoFinder output from all 47 species
Solyc11g012810.2.1 Solyc11g012810 chromatin-associated epigenetic factor 0.04 OrthoFinder output from all 47 species
Tin_g06037 No alias component *(ASI1) of ASI1-AIPP1-EDM2 chromaTin silencing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006346 DNA methylation-dependent heterochromatin formation IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0007005 mitochondrion organization IEP HCCA
BP GO:0007006 mitochondrial membrane organization IEP HCCA
BP GO:0007007 inner mitochondrial membrane organization IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009616 RNAi-mediated antiviral immune response IEP HCCA
BP GO:0010050 vegetative phase change IEP HCCA
BP GO:0010267 ta-siRNA processing IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016233 telomere capping IEP HCCA
BP GO:0016441 post-transcriptional gene silencing IEP HCCA
BP GO:0030422 siRNA processing IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0035194 RNA-mediated post-transcriptional gene silencing IEP HCCA
BP GO:0035196 miRNA processing IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
MF GO:0042162 telomeric DNA binding IEP HCCA
MF GO:0043047 single-stranded telomeric DNA binding IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0045039 protein insertion into mitochondrial inner membrane IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0045787 positive regulation of cell cycle IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0051204 protein insertion into mitochondrial membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
BP GO:0070918 regulatory ncRNA processing IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
BP GO:0090151 establishment of protein localization to mitochondrial membrane IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
MF GO:0098847 sequence-specific single stranded DNA binding IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:0140718 facultative heterochromatin formation IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 40 135
No external refs found!