LOC_Os01g13140 (Os01g0232200)


Aliases : Os01g0232200

Description : 35.1 not assigned.no ontology Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0000208 (Gene family) Phylogenetic Tree(s): OG0000208_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g13140
Cluster HCCA cluster: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
AT1G24130 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Gene family
AT1G24530 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Gene family
AT1G49450 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Gene family
AT2G26490 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Gene family
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Gene family
GSVIVT01000858001 No alias 31.1 cell.organisation Transducin/WD40 repeat-like... 0.01 Gene family
GSVIVT01007589001 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
GSVIVT01031882001 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
LOC_Os03g52870 Os03g0738700 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
LOC_Os12g40260 Os12g0594000 28.1 DNA.synthesis/chromatin structure Transducin/WD40... 0.03 Gene family
MA_10427021g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
MA_17987g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
MA_19051g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.01 Gene family
MA_913477g0010 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family
Smo66275 PACid_15406960 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Solyc01g109120.3.1 Solyc01g109120.3 28.1 DNA.synthesis/chromatin structure Transducin/WD40... 0.03 Gene family
Solyc03g111780.1.1 Solyc03g111780.1 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Solyc05g006340.3.1 Solyc05g006340.3 35.1 not assigned.no ontology Transducin/WD40... 0.02 Gene family
Solyc12g044320.2.1 Solyc12g044320.2 31.1 cell.organisation Transducin/WD40 repeat-like... 0.03 Gene family
Zm00001d003272 GRMZM2G022627 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 440 483
IPR001680 WD40_repeat 292 328
IPR001680 WD40_repeat 397 428
No external refs found!