AT5G09850

Description : Transcription elongation factor (TFIIS) family protein

Gene families : OG0000390 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G09850

Target	Alias	Description	ECC score	Gene Family Method
Adi_g012316	No alias	component *(MED26) of MEDIATOR transcription...	0.02	OrthoFinder output from all 47 species
Ceric.14G036300.1	Ceric.14G036300	component *(MED26) of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
Ceric.23G045200.1	Ceric.23G045200	not classified & original description: pacid=50610105...	0.05	OrthoFinder output from all 47 species
Dac_g16801	No alias	component *(MED26) of MEDIATOR transcription...	0.02	OrthoFinder output from all 47 species
Len_g24446	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g07133	No alias	component *(MED26) of MEDIATOR transcription...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008019	No alias	not classified & original description: CDS=1-1290	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR017923	TFIIS_N	147	194

External Links

No external refs found!