AT5G08580


Description : Calcium-binding EF hand family protein


Gene families : OG0005855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005855_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G08580
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Aop_g11799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_91036g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0009909 regulation of flower development RCA Interproscan
BP GO:0034968 histone lysine methylation RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005743 mitochondrial inner membrane IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0031056 regulation of histone modification IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0035065 regulation of histone acetylation IEP HCCA
BP GO:0040034 regulation of development, heterochronic IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048506 regulation of timing of meristematic phase transition IEP HCCA
BP GO:0048509 regulation of meristem development IEP HCCA
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0090239 regulation of histone H4 acetylation IEP HCCA
BP GO:1901983 regulation of protein acetylation IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000756 regulation of peptidyl-lysine acetylation IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 257 280
IPR002048 EF_hand_dom 305 365
IPR002048 EF_hand_dom 218 238
IPR002048 EF_hand_dom 181 193
No external refs found!