AT5G07650

Description : Actin-binding FH2 protein

Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G07650

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00058p00080420	evm_27.TU.AmTr_v1...	Formin-like protein 20 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
AT3G32400	No alias	Actin-binding FH2/DRF autoregulatory protein	0.04	OrthoFinder output from all 47 species
Aop_g42606	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g22086	AFH14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os03g31460.1	LOC_Os03g31460	Formin-like protein 12 OS=Oryza sativa subsp. japonica...	0.04	OrthoFinder output from all 47 species
LOC_Os06g08540.2	LOC_Os06g08540	Formin-like protein 6 OS=Oryza sativa subsp. japonica...	0.06	OrthoFinder output from all 47 species
Mp4g12830.1	AFH14	group-II formin actin filament elongation factor	0.03	OrthoFinder output from all 47 species
Smo404363	AFH14	Formin-like protein 6 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
Spa_g28002	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g44237	AFH14	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e018139_P003	Zm00001e018139	group-II formin actin filament elongation factor	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003779	actin binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
MF	GO:0008092	cytoskeletal protein binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR015425	FH2_Formin	323	449
IPR015425	FH2_Formin	56	270
IPR015425	FH2_Formin	455	543
IPR015425	FH2_Formin	564	788

External Links

No external refs found!