AT5G07500 (PEI1)

Aliases : PEI1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G07500

Target	Alias	Description	ECC score	Gene Family Method
AT1G03790	SOM	Zinc finger C-x8-C-x5-C-x3-H type family protein	0.07	OrthoFinder output from all 47 species
AT2G19810	No alias	CCCH-type zinc finger family protein	0.03	OrthoFinder output from all 47 species
Adi_g049127	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.04	OrthoFinder output from all 47 species
Adi_g049591	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g054845	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Adi_g075797	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Als_g20738	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aob_g20797	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aop_g06090	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aop_g13400	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Aop_g14316	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aop_g32930	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aspi01Gene08554.t2	Aspi01Gene08554	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aspi01Gene30050.t1	Aspi01Gene30050	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aspi01Gene68944.t1	Aspi01Gene68944	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Aspi01Gene71552.t1	Aspi01Gene71552	regulatory factor *(TZF) of mRNA stress granule...	0.06	OrthoFinder output from all 47 species
Azfi_s0060.g034819	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Azfi_s0076.g037758	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.05	OrthoFinder output from all 47 species
Azfi_s0279.g062249	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Cba_g05838	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Ceric.1Z168000.1	ATTZF1, ATCTH,...	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Ceric.23G017000.1	Ceric.23G017000	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Ceric.24G053600.1	Ceric.24G053600	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Cre03.g146267	ATTZF1, ATCTH	RNA biosynthesis.transcriptional activation.C3H zinc...	0.01	OrthoFinder output from all 47 species
Dac_g02872	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.05	OrthoFinder output from all 47 species
Dac_g08831	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Dac_g10045	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Dac_g15516	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Dde_g25533	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.04	OrthoFinder output from all 47 species
Dde_g27978	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Ehy_g08338	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
GSVIVT01013901001	PEI1	RNA biosynthesis.transcriptional activation.C3H zinc...	0.14	OrthoFinder output from all 47 species
GSVIVT01015265001	No alias	RNA biosynthesis.transcriptional activation.C3H zinc...	0.02	OrthoFinder output from all 47 species
LOC_Os01g53650.1	LOC_Os01g53650	mRNA-binding regulatory factor (TZF)	0.05	OrthoFinder output from all 47 species
LOC_Os05g10670.1	LOC_Os05g10670	mRNA-binding regulatory factor (TZF)	0.02	OrthoFinder output from all 47 species
LOC_Os05g45020.1	ATTZF1, ATCTH,...	mRNA-binding regulatory factor (TZF)	0.05	OrthoFinder output from all 47 species
LOC_Os07g47240.1	PEI1, LOC_Os07g47240	mRNA-binding regulatory factor (TZF)	0.03	OrthoFinder output from all 47 species
LOC_Os12g33090.1	LOC_Os12g33090	mRNA-binding regulatory factor (TZF)	0.05	OrthoFinder output from all 47 species
Len_g18302	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Len_g21927	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Len_g28700	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Len_g43879	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Lfl_g02270	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Lfl_g24865	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.04	OrthoFinder output from all 47 species
Mp6g00540.1	No alias	mRNA-binding regulatory factor (TZF)	0.02	OrthoFinder output from all 47 species
Msp_g10175	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.05	OrthoFinder output from all 47 species
Msp_g13456	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Ore_g15984	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Ore_g25247	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.04	OrthoFinder output from all 47 species
Ore_g29320	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Ore_g35856	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.07	OrthoFinder output from all 47 species
Pir_g24222	SZF2, ATSZF2, ZFAR1, CZF1	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Pir_g39344	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Pnu_g20981	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.04	OrthoFinder output from all 47 species
Pnu_g30312	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Ppi_g01109	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Ppi_g33576	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Ppi_g43622	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004066	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010425	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.04	OrthoFinder output from all 47 species
Sam_g28503	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Solyc05g041720.2.1	PEI1, Solyc05g041720	mRNA-binding regulatory factor (TZF)	0.07	OrthoFinder output from all 47 species
Solyc05g043247.1.1	ATTZF1, ATCTH,...	mRNA-binding regulatory factor (TZF)	0.04	OrthoFinder output from all 47 species
Solyc06g082010.4.1	Solyc06g082010	mRNA-binding regulatory factor (TZF)	0.03	OrthoFinder output from all 47 species
Solyc07g053750.1.1	SOM, Solyc07g053750	mRNA-binding regulatory factor (TZF)	0.08	OrthoFinder output from all 47 species
Solyc09g014640.2.1	PEI1, Solyc09g014640	mRNA-binding regulatory factor (TZF)	0.04	OrthoFinder output from all 47 species
Solyc09g014645.1.1	PEI1, Solyc09g014645	mRNA-binding regulatory factor (TZF)	0.04	OrthoFinder output from all 47 species
Solyc09g150108.1.1	PEI1, Solyc09g150108	mRNA-binding regulatory factor (TZF)	0.03	OrthoFinder output from all 47 species
Solyc12g008660.1.1	Solyc12g008660	mRNA-binding regulatory factor (TZF)	0.02	OrthoFinder output from all 47 species
Spa_g15791	ATTZF1, ATCTH	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Tin_g02786	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.02	OrthoFinder output from all 47 species
Tin_g04687	No alias	regulatory factor *(TZF) of mRNA stress granule...	0.03	OrthoFinder output from all 47 species
Zm00001e027454_P001	ATTZF1, ATCTH,...	mRNA-binding regulatory factor (TZF)	0.03	OrthoFinder output from all 47 species
Zm00001e029465_P001	Zm00001e029465	mRNA-binding regulatory factor (TZF)	0.02	OrthoFinder output from all 47 species
Zm00001e032199_P001	ATTZF1, ATCTH,...	mRNA-binding regulatory factor (TZF)	0.05	OrthoFinder output from all 47 species
Zm00001e039753_P001	Zm00001e039753	mRNA-binding regulatory factor (TZF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	RCA	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009790	embryo development	None	Extended
BP	GO:0009793	embryo development ending in seed dormancy	IMP	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005667	transcription regulator complex	IEP	HCCA
BP	GO:0006869	lipid transport	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0009410	response to xenobiotic stimulus	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010022	meristem determinacy	IEP	HCCA
BP	GO:0010080	regulation of floral meristem growth	IEP	HCCA
BP	GO:0010081	regulation of inflorescence meristem growth	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010115	regulation of abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0010116	positive regulation of abscisic acid biosynthetic process	IEP	HCCA
BP	GO:0010262	somatic embryogenesis	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0010371	regulation of gibberellin biosynthetic process	IEP	HCCA
BP	GO:0010373	negative regulation of gibberellin biosynthetic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010565	regulation of cellular ketone metabolic process	IEP	HCCA
BP	GO:0010582	floral meristem determinacy	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
CC	GO:0016602	CCAAT-binding factor complex	IEP	HCCA
MF	GO:0016717	oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	IEP	HCCA
BP	GO:0019216	regulation of lipid metabolic process	IEP	HCCA
BP	GO:0019747	regulation of isoprenoid metabolic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0031099	regeneration	IEP	HCCA
CC	GO:0031225	obsolete anchored component of membrane	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0043455	regulation of secondary metabolic process	IEP	HCCA
MF	GO:0045300	acyl-[acyl-carrier-protein] desaturase activity	IEP	HCCA
MF	GO:0045735	nutrient reservoir activity	IEP	HCCA
BP	GO:0045827	negative regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0045828	positive regulation of isoprenoid metabolic process	IEP	HCCA
BP	GO:0045833	negative regulation of lipid metabolic process	IEP	HCCA
BP	GO:0045834	positive regulation of lipid metabolic process	IEP	HCCA
BP	GO:0045893	positive regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0046889	positive regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0046890	regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051055	negative regulation of lipid biosynthetic process	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051254	positive regulation of RNA metabolic process	IEP	HCCA
BP	GO:0062012	regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0062013	positive regulation of small molecule metabolic process	IEP	HCCA
BP	GO:0062014	negative regulation of small molecule metabolic process	IEP	HCCA
CC	GO:0090575	RNA polymerase II transcription regulator complex	IEP	HCCA
BP	GO:1902680	positive regulation of RNA biosynthetic process	IEP	HCCA
BP	GO:1902930	regulation of alcohol biosynthetic process	IEP	HCCA
BP	GO:1902932	positive regulation of alcohol biosynthetic process	IEP	HCCA
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000571	Znf_CCCH	97	117

External Links

No external refs found!

AT5G07500 (PEI1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation