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  5. AT5G07330

AT5G07330


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G63060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0004991 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G07330
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Aop_g68790 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene26400.t1 Aspi01Gene26400 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0063.g035316 No alias not classified & original description: CDS=230-799 0.09 OrthoFinder output from all 47 species
Ceric.30G066900.1 Ceric.30G066900 not classified & original description: pacid=50609357... 0.09 OrthoFinder output from all 47 species
Gb_38754 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os11g32890.1 LOC_Os11g32890 no hits & (original description: none) 0.17 OrthoFinder output from all 47 species
MA_241562g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_91457g0010 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Mp2g06940.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g09848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g17691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g44303 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g118050.3.1 Solyc03g118050 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species
Zm00001e011166_P002 Zm00001e011166 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0006457 protein folding RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0009408 response to heat RCA Interproscan
BP GO:0009644 response to high light intensity RCA Interproscan
BP GO:0042542 response to hydrogen peroxide RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000104 succinate dehydrogenase activity IEP HCCA
BP GO:0001101 response to acid chemical IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006121 mitochondrial electron transport, succinate to ubiquinone IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006970 response to osmotic stress IEP HCCA
BP GO:0007029 endoplasmic reticulum organization IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0009409 response to cold IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009791 post-embryonic development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009933 meristem structural organization IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010344 seed oilbody biogenesis IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
CC GO:0045281 succinate dehydrogenase complex IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
CC GO:0071458 obsolete integral component of cytoplasmic side of endoplasmic reticulum membrane IEP HCCA
CC GO:0071782 endoplasmic reticulum tubular network IEP HCCA
BP GO:0071786 endoplasmic reticulum tubular network organization IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
CC GO:0098827 endoplasmic reticulum subcompartment IEP HCCA

No InterPro domains available for this sequence

No external refs found!