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  5. AT5G06610

AT5G06610


Description : Protein of unknown function (DUF620)


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G06610

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00180180 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00133p00115060 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g10862 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11021 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03158 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00596 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03174 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09619 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50254.t1 Aspi01Gene50254 GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene63743.t1 Aspi01Gene63743 GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0031.g024486 No alias GTPase effector *(BDR) & original description: CDS=183-1394 0.04 OrthoFinder output from all 47 species
Azfi_s0038.g026341 No alias GTPase effector *(BDR) & original description: CDS=255-1508 0.03 OrthoFinder output from all 47 species
Azfi_s0050.g031036 No alias GTPase effector *(BDR) & original description: CDS=812-1645 0.04 OrthoFinder output from all 47 species
Cba_g17398 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G061800.1 Ceric.25G061800 GTPase effector *(BDR) & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g02175 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g02214 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14931 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g37138 No alias GTPase effector *(BDR) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g39476 No alias GTPase effector *(BDR) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g41584 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g11719 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02503 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009382001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01033432001 No alias Chromatin organisation.histone modifications.histone... 0.08 OrthoFinder output from all 47 species
GSVIVT01036716001 No alias No description available 0.19 OrthoFinder output from all 47 species
GSVIVT01037884001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_21083 No alias GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os03g16060.1 LOC_Os03g16060 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
LOC_Os10g27110.1 LOC_Os10g27110 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
LOC_Os10g27120.1 LOC_Os10g27120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Lfl_g04065 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19621 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29419 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_133920g0010 No alias GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
MA_21627g0010 No alias GTPase effector (BDR) 0.09 OrthoFinder output from all 47 species
Msp_g15164 No alias GTPase effector *(BDR) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g01199 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15972 No alias GTPase effector *(BDR) & original description: none 0.08 OrthoFinder output from all 47 species
Pir_g06945 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01139 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06354 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g11922 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024239 No alias GTPase effector *(BDR) & original description: CDS=316-1776 0.03 OrthoFinder output from all 47 species
Sam_g11658 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11659 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19310 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19311 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g085490.2.1 Solyc02g085490 GTPase effector (BDR) 0.05 OrthoFinder output from all 47 species
Spa_g41215 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55614 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01193 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.05 OrthoFinder output from all 47 species
Zm00001e010682_P001 Zm00001e010682 GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
Zm00001e035436_P001 Zm00001e035436 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
Zm00001e038067_P001 Zm00001e038067 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010016 shoot system morphogenesis IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
BP GO:0048438 floral whorl development IEP HCCA
BP GO:0048439 flower morphogenesis IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0090698 post-embryonic plant morphogenesis IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 105 347
No external refs found!