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  5. AT5G06270

AT5G06270


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11600.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0001529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G06270

Target Alias Description ECC score Gene Family Method Actions
AT3G52561 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
Als_g46838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29676 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g25511 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01036804001 No alias No description available 0.06 OrthoFinder output from all 47 species
Nbi_g13640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31586 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g23973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g066570.4.1 Solyc07g066570 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Spa_g30856 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41296 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e005209_P001 Zm00001e005209 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e012345_P001 Zm00001e012345 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0007389 pattern specification process IEP HCCA
BP GO:0008361 regulation of cell size IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
BP GO:0009832 plant-type cell wall biogenesis IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010015 root morphogenesis IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!