1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G05570

AT5G05570


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG0002049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002049_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G05570
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
Adi_g083853 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.05 OrthoFinder output from all 47 species
Aev_g38895 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ala_g07812 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.07 OrthoFinder output from all 47 species
Aob_g25755 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.06 OrthoFinder output from all 47 species
Aspi01Gene53139.t1 Aspi01Gene53139 regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Ceric.04G073600.1 Ceric.04G073600 regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ceric.24G067200.1 Ceric.24G067200 regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Dde_g04947 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
GSVIVT01032802001 No alias No description available 0.06 OrthoFinder output from all 47 species
LOC_Os07g49300.1 LOC_Os07g49300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g00760 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Lfl_g02377 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.05 OrthoFinder output from all 47 species
MA_1162212g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7753240g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_8863348g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp8g09160.1 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Msp_g15434 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.04 OrthoFinder output from all 47 species
Nbi_g25345 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Ore_g29227 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Pnu_g00859 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Ppi_g06999 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species
Sam_g08073 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.02 OrthoFinder output from all 47 species
Smo413341 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc09g005600.3.1 Solyc09g005600 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g05717 No alias regulatory protein *(TMS) of vesicle trafficking &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
CC GO:0000325 plant-type vacuole IEP HCCA
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
CC GO:0005829 cytosol IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006875 cellular metal ion homeostasis IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0006983 ER overload response IEP HCCA
BP GO:0006984 ER-nucleus signaling pathway IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008281 sulfonylurea receptor activity IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009653 anatomical structure morphogenesis IEP HCCA
BP GO:0009826 unidimensional cell growth IEP HCCA
BP GO:0009846 pollen germination IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
BP GO:0009896 positive regulation of catabolic process IEP HCCA
BP GO:0009932 cell tip growth IEP HCCA
BP GO:0010191 mucilage metabolic process IEP HCCA
BP GO:0010192 mucilage biosynthetic process IEP HCCA
BP GO:0010506 regulation of autophagy IEP HCCA
BP GO:0010508 positive regulation of autophagy IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016049 cell growth IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030007 cellular potassium ion homeostasis IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0031331 positive regulation of cellular catabolic process IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0034263 positive regulation of autophagy in response to ER overload IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040007 growth IEP HCCA
BP GO:0043090 amino acid import IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP HCCA
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048588 developmental cell growth IEP HCCA
BP GO:0048589 developmental growth IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:0060560 developmental growth involved in morphogenesis IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0071216 cellular response to biotic stimulus IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001388 Synaptobrevin-like 1061 1120
No external refs found!