AT5G05400

Description : LRR and NB-ARC domains-containing disease resistance protein

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G05400

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00126150	RPS5,...	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
AT1G12220	RPS5	Disease resistance protein (CC-NBS-LRR class) family	0.04	OrthoFinder output from all 47 species
AT1G12280	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT1G12290	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.07	OrthoFinder output from all 47 species
AT1G61180	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.07	OrthoFinder output from all 47 species
AT1G61190	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT1G61300	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.05	OrthoFinder output from all 47 species
AT1G61310	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.03	OrthoFinder output from all 47 species
AT1G63360	No alias	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
AT4G10780	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.07	OrthoFinder output from all 47 species
AT4G27190	No alias	NB-ARC domain-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
AT5G47250	No alias	LRR and NB-ARC domains-containing disease resistance protein	0.04	OrthoFinder output from all 47 species
Adi_g074819	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g082458	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g36455	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g32394	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01017020001	No alias	Probable disease resistance protein At5g63020...	0.06	OrthoFinder output from all 47 species
GSVIVT01017149001	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01038404001	No alias	Probable disease resistance protein At1g12290...	0.1	OrthoFinder output from all 47 species
Gb_04767	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Gb_12853	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_16713	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_22369	RPS5	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Gb_26475	RPS5	Putative disease resistance protein RGA3 OS=Solanum...	0.03	OrthoFinder output from all 47 species
Gb_40379	ZAR1	Putative disease resistance protein At1g58400...	0.04	OrthoFinder output from all 47 species
LOC_Os01g72680.1	RPS5, LOC_Os01g72680	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_10265639g0010	No alias	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_10274199g0010	RFL1	Disease resistance protein RFL1 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
MA_10329611g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10352957g0010	No alias	Probable disease resistance protein At5g43730...	0.04	OrthoFinder output from all 47 species
MA_10426603g0010	No alias	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
MA_10426937g0010	No alias	Probable disease resistance protein At5g63020...	0.04	OrthoFinder output from all 47 species
MA_10426937g0020	No alias	Probable disease resistance protein At4g27220...	0.03	OrthoFinder output from all 47 species
MA_104304g0010	No alias	Disease resistance protein SUMM2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_10432804g0010	No alias	Putative disease resistance protein At4g10780...	0.04	OrthoFinder output from all 47 species
MA_10434517g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_10435822g0010	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_10435995g0040	No alias	Probable disease resistance protein At4g27220...	0.04	OrthoFinder output from all 47 species
MA_10436071g0010	No alias	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
MA_10436599g0010	RFL1	Disease resistance protein RFL1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_10436967g0010	RPS5	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
MA_10437240g0020	No alias	Probable disease resistance protein At1g61180...	0.03	OrthoFinder output from all 47 species
MA_122523g0010	No alias	Disease resistance protein RFL1 OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
MA_125257g0010	No alias	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species
MA_159548g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_182556g0010	No alias	Probable disease resistance protein At1g61180...	0.03	OrthoFinder output from all 47 species
MA_188095g0010	No alias	Probable disease resistance protein At1g61310...	0.02	OrthoFinder output from all 47 species
MA_23524g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
MA_2485847g0010	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
MA_259247g0030	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_31174g0010	No alias	Probable disease resistance protein At1g61190...	0.04	OrthoFinder output from all 47 species
MA_322817g0010	No alias	Probable disease resistance protein At1g61190...	0.03	OrthoFinder output from all 47 species
MA_355252g0010	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_421862g0010	No alias	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_5216516g0010	No alias	Probable disease resistance protein At5g63020...	0.08	OrthoFinder output from all 47 species
MA_5270774g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_690530g0010	No alias	Probable disease resistance protein At5g43730...	0.03	OrthoFinder output from all 47 species
MA_728287g0010	No alias	Probable disease resistance protein At1g61300...	0.03	OrthoFinder output from all 47 species
MA_77943g0010	No alias	Putative disease resistance protein At4g10780...	0.05	OrthoFinder output from all 47 species
MA_781140g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_7833161g0010	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
MA_8365843g0010	No alias	Disease resistance protein At4g27190 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_837862g0010	No alias	Probable disease resistance protein At5g63020...	0.04	OrthoFinder output from all 47 species
MA_8869735g0010	No alias	Probable disease resistance protein At1g61300...	0.05	OrthoFinder output from all 47 species
MA_895110g0010	RPS5	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_91465g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Pir_g48677	RPS5	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Pp3c3_1460V3.1	Pp3c3_1460	Disease resistance protein (CC-NBS-LRR class) family	0.02	OrthoFinder output from all 47 species
Solyc02g036270.4.1	Solyc02g036270	Probable disease resistance protein At4g27220...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0006826	iron ion transport	RCA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010106	cellular response to iron ion starvation	RCA	Interproscan
BP	GO:0010167	response to nitrate	RCA	Interproscan
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0015706	nitrate transmembrane transport	RCA	Interproscan
BP	GO:0030001	metal ion transport	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098661	inorganic anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901698	response to nitrogen compound	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended
BP	GO:1902025	nitrate import	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	527	582
IPR002182	NB-ARC	160	381

External Links

No external refs found!

AT5G05400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation