AT5G05330

Description : HMG-box (high mobility group) DNA-binding family protein

Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G05330

Target	Alias	Description	ECC score	Gene Family Method
AT4G11080	No alias	HMG (high mobility group) box protein	0.04	OrthoFinder output from all 47 species
Als_g06129	NFD2, HMG BETA...	DNA bending architectural protein *(HMG-B) & original...	0.03	OrthoFinder output from all 47 species
Als_g13580	HMGB6	DNA bending architectural protein *(HMG-B) & original...	0.03	OrthoFinder output from all 47 species
Aob_g08723	NFD03, HMGB3, NFD3	DNA bending architectural protein *(HMG-B) & original...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000553.19	NFD03, HMGB3, NFD3	FACT complex subunit SSRP1 OS=Vicia faba	0.02	OrthoFinder output from all 47 species
Ehy_g11468	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g04305	NFD1, HMGB1	DNA bending architectural protein *(HMG-B) & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

External Links

No external refs found!