AT5G05270

Description : Chalcone-flavanone isomerase family protein

Gene families : OG0002319 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002319_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G05270
Cluster	HCCA: Cluster_128

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00077p00075600	evm_27.TU.AmTr_v1...	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
Als_g37009	No alias	chalcone isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g07581	No alias	chalcone isomerase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.09G016600.1	Ceric.09G016600	chalcone isomerase & original description:...	0.06	OrthoFinder output from all 47 species
Dac_g11451	No alias	chalcone isomerase & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g49503	No alias	chalcone isomerase & original description: none	0.06	OrthoFinder output from all 47 species
Dde_g02028	No alias	chalcone isomerase & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g11422	No alias	chalcone isomerase & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01032685001	No alias	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
LOC_Os11g02440.1	LOC_Os11g02440	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Len_g01030	No alias	chalcone isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g16352	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g30159	No alias	chalcone isomerase & original description: none	0.06	OrthoFinder output from all 47 species
MA_502949g0010	No alias	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis...	0.08	OrthoFinder output from all 47 species
Mp4g03560.1	No alias	Fatty-acid-binding protein 3, chloroplastic...	0.02	OrthoFinder output from all 47 species
Mp5g01410.1	No alias	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Msp_g25257	No alias	chalcone isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g31384	No alias	chalcone isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g11170	No alias	chalcone isomerase & original description: none	0.06	OrthoFinder output from all 47 species
Pp3c4_25770V3.1	Pp3c4_25770	Chalcone-flavanone isomerase family protein	0.02	OrthoFinder output from all 47 species
Ppi_g38923	No alias	chalcone isomerase & original description: none	0.02	OrthoFinder output from all 47 species
Smo227414	No alias	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Solyc05g052240.3.1	Solyc05g052240	Probable chalcone--flavonone isomerase 3 OS=Arabidopsis...	0.1	OrthoFinder output from all 47 species
Spa_g03063	No alias	chalcone isomerase & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g10892	No alias	chalcone isomerase & original description: none	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009411	response to UV	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009718	anthocyanin-containing compound biosynthetic process	RCA	Interproscan
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009812	flavonoid metabolic process	None	Extended
BP	GO:0009813	flavonoid biosynthetic process	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010224	response to UV-B	RCA	Interproscan
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046283	anthocyanin-containing compound metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004364	glutathione transferase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
CC	GO:0009705	plant-type vacuole membrane	IEP	HCCA
BP	GO:0009714	chalcone metabolic process	IEP	HCCA
BP	GO:0009715	chalcone biosynthetic process	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009733	response to auxin	IEP	HCCA
BP	GO:0009808	lignin metabolic process	IEP	HCCA
BP	GO:0009809	lignin biosynthetic process	IEP	HCCA
BP	GO:0009914	hormone transport	IEP	HCCA
BP	GO:0009926	auxin polar transport	IEP	HCCA
BP	GO:0009962	regulation of flavonoid biosynthetic process	IEP	HCCA
BP	GO:0010208	pollen wall assembly	IEP	HCCA
BP	GO:0010584	pollen exine formation	IEP	HCCA
BP	GO:0010927	cellular component assembly involved in morphogenesis	IEP	HCCA
MF	GO:0016207	4-coumarate-CoA ligase activity	IEP	HCCA
MF	GO:0016210	naringenin-chalcone synthase activity	IEP	HCCA
MF	GO:0016405	CoA-ligase activity	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016621	cinnamoyl-CoA reductase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	HCCA
MF	GO:0016711	flavonoid 3'-monooxygenase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
MF	GO:0016872	intramolecular lyase activity	IEP	HCCA
MF	GO:0016877	ligase activity, forming carbon-sulfur bonds	IEP	HCCA
MF	GO:0016878	acid-thiol ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019748	secondary metabolic process	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
CC	GO:0031312	extrinsic component of organelle membrane	IEP	HCCA
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	HCCA
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	HCCA
BP	GO:0042180	cellular ketone metabolic process	IEP	HCCA
BP	GO:0042181	ketone biosynthetic process	IEP	HCCA
CC	GO:0042406	extrinsic component of endoplasmic reticulum membrane	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
MF	GO:0045430	chalcone isomerase activity	IEP	HCCA
MF	GO:0045486	naringenin 3-dioxygenase activity	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA
BP	GO:0060918	auxin transport	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
BP	GO:1900384	regulation of flavonol biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016087	Chalcone_isomerase	10	206

External Links

No external refs found!

AT5G05270

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation