AT5G05230

Description : RING/U-box superfamily protein

Gene families : OG0000864 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000864_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G05230

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0019.g015005	No alias	E3 ubiquitin ligase & original description: CDS=415-1941	0.01	OrthoFinder output from all 47 species
Ceric.28G062900.1	Ceric.28G062900	E3 ubiquitin ligase & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.34G024200.1	Ceric.34G024200	E3 ubiquitin ligase & original description:...	0.01	OrthoFinder output from all 47 species
Mp7g14730.1	No alias	U-box domain-containing protein 62 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	187	250

External Links

No external refs found!