LOC_Os01g12440 (Os01g0224100)


Aliases : Os01g0224100

Description : No description available


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os01g12440
Cluster HCCA cluster: Cluster_234

Target Alias Description ECC score Gene Family Method Actions
AT1G78080 RAP2.4 related to AP2 4 0.04 Gene family
AT5G13330 Rap2.6L related to AP2 6l 0.03 Gene family
GSVIVT01017315001 No alias No description available 0.04 Gene family
GSVIVT01035098001 No alias No description available 0.03 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os05g41760 Os05g0497200 No description available 0.03 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os10g30840 No alias No description available 0.02 Gene family
MA_10031781g0010 No alias No description available 0.04 Gene family
MA_4032g0010 No alias No description available 0.02 Gene family
MA_4072g0020 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_77420g0010 No alias No description available 0.04 Gene family
Solyc02g067020.1.1 Solyc02g067020.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc02g077360.1.1 Solyc02g077360.1 No description available 0.02 Gene family
Solyc02g077840.1.1 Solyc02g077840.1 No description available 0.02 Gene family
Solyc03g117230.1.1 Solyc03g117230.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
Solyc07g064890.1.1 Solyc07g064890.1 No description available 0.02 Gene family
Solyc12g009490.2.1 Solyc12g009490.2 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Solyc12g056980.1.1 Solyc12g056980.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d008872 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.04 Gene family
Zm00001d011499 GRMZM2G151542 No description available 0.02 Gene family
Zm00001d012584 GRMZM2G132223 No description available 0.02 Gene family
Zm00001d025409 GRMZM2G175525 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d027925 GRMZM2G018984 No description available 0.03 Gene family
Zm00001d038001 GRMZM2G093595 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d038584 GRMZM2G020016 No description available 0.02 Gene family
Zm00001d046501 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.03 Gene family
Zm00001d050948 GRMZM2G120401,... 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 148 198
No external refs found!