AT5G04220 (NTMC2T1.3, SYT3,...)

Aliases : NTMC2T1.3, SYT3, NTMC2TYPE1.3, ATSYTC, SYTC

Description : Calcium-dependent lipid-binding (CaLB domain) family protein

Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G04220
Cluster	HCCA: Cluster_63

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020354	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g36035	NTMC2T1.2, SYTB,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g01841	SYT5, NTMC2T2.1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g19319	SYT5, NTMC2T2.1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12444	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.01G110500.1	NTMC2TYPE4,...	not classified & original description: pacid=50591328...	0.03	OrthoFinder output from all 47 species
Ceric.02G074800.1	NTMC2T1.2, SYTB,...	membrane tethering protein (SYT1) of...	0.04	OrthoFinder output from all 47 species
Cre01.g044650	NTMC2T1.2, SYTB,...	Synaptotagmin-2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Dde_g07532	SYT5, NTMC2T2.1,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g01520	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Len_g00613	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp3g04670.1	NTMC2TYPE4, NTMC2T4	Synaptotagmin-4 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Msp_g02454	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Msp_g13131	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g18699	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g18414	SYT5, NTMC2T2.1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g06041	NTMC2TYPE4, NTMC2T4	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g01098	SYT5, NTMC2T2.1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009038	NTMC2T1.2, SYTB,...	membrane tethering protein (SYT1) of...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015422	NTMC2TYPE4, NTMC2T4	component *(CPSF100/Ydh1) of Cleavage and...	0.02	OrthoFinder output from all 47 species
Sam_g15399	No alias	membrane tethering protein (SYT1) of...	0.02	OrthoFinder output from all 47 species
Solyc12g009695.1.1	SYT5, NTMC2T2.1,...	Synaptotagmin-5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc12g009790.2.1	SYT5, NTMC2T2.1,...	Synaptotagmin-5 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Tin_g02789	SYT5, NTMC2T2.1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006694	steroid biosynthetic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006722	triterpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008202	steroid metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0016104	triterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016125	sterol metabolic process	None	Extended
BP	GO:0016126	sterol biosynthetic process	RCA	Interproscan
BP	GO:0019742	pentacyclic triterpenoid metabolic process	None	Extended
BP	GO:0019745	pentacyclic triterpenoid biosynthetic process	RCA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0004124	cysteine synthase activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0010043	response to zinc ion	IEP	HCCA
BP	GO:0010286	heat acclimation	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0034605	cellular response to heat	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0070370	cellular heat acclimation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000008	C2_dom	199	301
IPR000008	C2_dom	40	139

External Links

No external refs found!

AT5G04220 (NTMC2T1.3, SYT3,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation