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  5. AT5G03250

AT5G03250


Description : Phototropic-responsive NPH3 family protein


Gene families : OG0000772 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G03250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00148p00085230 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g30440... 0.02 OrthoFinder output from all 47 species
Cba_g24771 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Ehy_g03948 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os01g57230.1 LOC_Os01g57230 BTB/POZ domain-containing protein At5g03250... 0.05 OrthoFinder output from all 47 species
LOC_Os12g41910.2 LOC_Os12g41910 BTB/POZ domain-containing protein At1g30440... 0.05 OrthoFinder output from all 47 species
MA_38486g0010 No alias BTB/POZ domain-containing protein At1g30440... 0.03 OrthoFinder output from all 47 species
Ore_g26132 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Pnu_g17535 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12631 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Sam_g19593 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g007820.2.1 Solyc09g007820 BTB/POZ domain-containing protein At5g03250... 0.05 OrthoFinder output from all 47 species
Zm00001e019629_P002 Zm00001e019629 BTB/POZ domain-containing protein At5g03250... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009416 response to light stimulus ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004396 hexokinase activity IEP HCCA
MF GO:0004565 beta-galactosidase activity IEP HCCA
MF GO:0005337 nucleoside transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0009555 pollen development IEP HCCA
BP GO:0009786 regulation of asymmetric cell division IEP HCCA
BP GO:0009894 regulation of catabolic process IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0031329 regulation of cellular catabolic process IEP HCCA
BP GO:0048229 gametophyte development IEP HCCA
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0061013 regulation of mRNA catabolic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 217 478
IPR000210 BTB/POZ_dom 25 114
No external refs found!