AT5G02390

Description : Protein of unknown function (DUF3741)

Gene families : OG0000937 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000937_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G02390
Cluster	HCCA: Cluster_91

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0065.g035990	No alias	not classified & original description: CDS=440-3595	0.03	OrthoFinder output from all 47 species
Cba_g24853	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.13G047000.1	Ceric.13G047000	not classified & original description: pacid=50636886...	0.04	OrthoFinder output from all 47 species
Ehy_g06162	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g29880	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Gb_21932	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Nbi_g41732	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g13825	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020959	No alias	not classified & original description: CDS=389-3550	0.02	OrthoFinder output from all 47 species
Sam_g09091	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g48072	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e002957_P004	Zm00001e002957	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0022412	cellular process involved in reproduction in multicellular organism	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0030154	cell differentiation	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048235	pollen sperm cell differentiation	IEP	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	HCCA
BP	GO:0022406	membrane docking	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
BP	GO:0048278	vesicle docking	IEP	HCCA
BP	GO:0051640	organelle localization	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA
BP	GO:0140029	exocytic process	IEP	HCCA
BP	GO:0140056	organelle localization by membrane tethering	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR022212	DUF3741	264	310
IPR025486	DUF4378	665	830

External Links

No external refs found!