1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT5G02340

AT5G02340


Description : Cysteine/Histidine-rich C1 domain family protein


Gene families : OG0007015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G02340

Target Alias Description ECC score Gene Family Method Actions
AT1G29179 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from all 47 species
AT1G61710 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT1G66440 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT2G02680 No alias Cysteine/Histidine-rich C1 domain family protein 0.04 OrthoFinder output from all 47 species
AT3G26550 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT3G50010 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT4G15070 No alias Cysteine/Histidine-rich C1 domain family protein 0.03 OrthoFinder output from all 47 species
AT5G03355 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G37210 No alias Cysteine/Histidine-rich C1 domain family protein 0.02 OrthoFinder output from all 47 species
AT5G48320 No alias Cysteine/Histidine-rich C1 domain family protein 0.06 OrthoFinder output from all 47 species
AT5G55770 No alias Cysteine/Histidine-rich C1 domain family protein 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0043934 sporulation IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR004146 DC1 517 565
IPR004146 DC1 258 305
IPR004146 DC1 341 389
IPR004146 DC1 204 248
IPR004146 DC1 398 449
No external refs found!