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  5. AT5G01970

AT5G01970


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G30050.1); Has 240 Blast hits to 236 proteins in 72 species: Archae - 0; Bacteria - 15; Metazoa - 51; Fungi - 19; Plants - 119; Viruses - 0; Other Eukaryotes - 36 (source: NCBI BLink).


Gene families : OG0001542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01970

Target Alias Description ECC score Gene Family Method Actions
Adi_g114077 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12347 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04515 No alias myosin adaptor protein *(MadA) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06172 No alias myosin adaptor protein *(MadA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57849 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017832 No alias myosin adaptor protein *(MadA) & original description:... 0.02 OrthoFinder output from all 47 species
Spa_g08764 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005794 Golgi apparatus IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0030308 negative regulation of cell growth IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0045926 negative regulation of growth IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!