AT5G01770 (RAPTOR1A, ATRAPTOR1A, RAPTOR2)

Aliases : RAPTOR1A, ATRAPTOR1A, RAPTOR2

Description : HEAT repeat ;WD domain, G-beta repeat protein protein

Gene families : OG0002561 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002561_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G01770

Target	Alias	Description	ECC score	Gene Family Method
Aob_g07434	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene00551.t1	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.03	OrthoFinder output from all 47 species
Dde_g05966	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.02	OrthoFinder output from all 47 species
Ehy_g20627	RAPTOR1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g20810	RAPTOR1,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os12g01922.1	RAPTOR1,...	regulatory component RAPTOR of TORC complex	0.03	OrthoFinder output from all 47 species
Len_g14165	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0713.g027625	RAPTOR1,...	regulatory component *(RAPTOR) of TORC complex &...	0.02	OrthoFinder output from all 47 species
Sam_g29252	No alias	regulatory component *(RAPTOR) of TORC complex &...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	None	Extended
MF	GO:0000166	nucleotide binding	ISS	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016049	cell growth	IMP	Interproscan
CC	GO:0031461	cullin-RING ubiquitin ligase complex	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0040007	growth	None	Extended
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	ISS	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990234	transferase complex	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0080188	gene silencing by RNA-directed DNA methylation	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR029347	Raptor_N	94	246

External Links

No external refs found!