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AT5G01640 (PRA1.B5)


Aliases : PRA1.B5

Description : prenylated RAB acceptor 1.B5


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G01640
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
Als_g42675 PRA1.E B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g52368 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11478 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g00478 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g47005 PRA1.B5 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06416 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08497 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g00295 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e023951_P001 PRA1.B2, Zm00001e023951 B-G-class Rab-GDF protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
BP GO:0016192 vesicle-mediated transport IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP HCCA
CC GO:0008287 protein serine/threonine phosphatase complex IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0030148 sphingolipid biosynthetic process IEP HCCA
BP GO:0034605 cellular response to heat IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
MF GO:0045140 inositol phosphoceramide synthase activity IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
CC GO:1903293 phosphatase complex IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 51 193
No external refs found!