AT5G01270 (CPL2, ATCPL2)

Aliases : CPL2, ATCPL2

Description : carboxyl-terminal domain (ctd) phosphatase-like 2

Gene families : OG0002263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002263_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G01270

Target	Alias	Description	ECC score	Gene Family Method
Adi_g020486	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Adi_g058427	ATCPL1, CPL1, FRY2	group-I RNA polymerase-II phosphatase & original...	0.03	OrthoFinder output from all 47 species
Adi_g107291	ATCPL1, CPL1, FRY2	group-I RNA polymerase-II phosphatase & original...	0.02	OrthoFinder output from all 47 species
Aev_g06171	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g07037	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.06	OrthoFinder output from all 47 species
Als_g14449	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g13452	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g12939	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene27052.t1	CPL2, ATCPL2,...	subcluster CPL phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0003.g007650	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: CDS=1-2355	0.03	OrthoFinder output from all 47 species
Cba_g12689	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.08	OrthoFinder output from all 47 species
Cba_g34635	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.03G049400.1	ATCPL1, CPL1,...	subcluster CPL phosphatase & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.07G074800.1	ATCPL1, CPL1,...	subcluster CPL phosphatase & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g03418	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g07780	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01006447001	ATCPL1, CPL1, FRY2	RNA polymerase II C-terminal domain phosphatase-like 1...	0.06	OrthoFinder output from all 47 species
GSVIVT01006448001	ATCPL1, CPL1, FRY2	Protein modification.dephosphorylation.aspartate-based...	0.06	OrthoFinder output from all 47 species
Len_g12188	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
MA_10428587g0020	ATCPL1, CPL1, FRY2	RNA polymerase-II phosphatase	0.02	OrthoFinder output from all 47 species
MA_18750g0010	ATCPL1, CPL1, FRY2	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Mp4g06900.1	ATCPL1, CPL1, FRY2	RNA polymerase-II phosphatase. CPL phosphatase	0.04	OrthoFinder output from all 47 species
Msp_g07706	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g01492	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g27282	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g29272	No alias	subcluster CPL phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g38752	No alias	subcluster CPL phosphatase & original description: none	0.04	OrthoFinder output from all 47 species
Smo173599	ATCPL1, CPL1, FRY2	Protein modification.dephosphorylation.aspartate-based...	0.02	OrthoFinder output from all 47 species
Solyc02g078550.3.1	ATCPL1, CPL1,...	RNA polymerase-II phosphatase. CPL phosphatase	0.05	OrthoFinder output from all 47 species
Spa_g54226	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g06700	ATCPL1, CPL1, FRY2	subcluster CPL phosphatase & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003725	double-stranded RNA binding	ISS	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006970	response to osmotic stress	IMP	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009734	auxin-activated signaling pathway	IMP	Interproscan
BP	GO:0009755	hormone-mediated signaling pathway	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	IDA	Interproscan
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
BP	GO:0040007	growth	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IMP	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048589	developmental growth	IMP	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000059	obsolete protein import into nucleus, docking	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0001709	cell fate determination	IEP	HCCA
MF	GO:0004712	protein serine/threonine/tyrosine kinase activity	IEP	HCCA
CC	GO:0005643	nuclear pore	IEP	HCCA
CC	GO:0005829	cytosol	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0006487	protein N-linked glycosylation	IEP	HCCA
BP	GO:0006873	cellular monoatomic ion homeostasis	IEP	HCCA
BP	GO:0006875	cellular metal ion homeostasis	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
MF	GO:0008565	obsolete protein transporter activity	IEP	HCCA
BP	GO:0009846	pollen germination	IEP	HCCA
BP	GO:0009910	negative regulation of flower development	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
BP	GO:0010073	meristem maintenance	IEP	HCCA
BP	GO:0010152	pollen maturation	IEP	HCCA
BP	GO:0010383	cell wall polysaccharide metabolic process	IEP	HCCA
BP	GO:0010393	galacturonan metabolic process	IEP	HCCA
BP	GO:0010410	hemicellulose metabolic process	IEP	HCCA
BP	GO:0010413	glucuronoxylan metabolic process	IEP	HCCA
BP	GO:0016036	cellular response to phosphate starvation	IEP	HCCA
BP	GO:0019725	cellular homeostasis	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
BP	GO:0030003	cellular monoatomic cation homeostasis	IEP	HCCA
BP	GO:0030243	cellulose metabolic process	IEP	HCCA
BP	GO:0034406	cell wall beta-glucan metabolic process	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
BP	GO:0042542	response to hydrogen peroxide	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	HCCA
BP	GO:0044038	cell wall macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
BP	GO:0045488	pectin metabolic process	IEP	HCCA
BP	GO:0045491	xylan metabolic process	IEP	HCCA
BP	GO:0045492	xylan biosynthetic process	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
BP	GO:0048581	negative regulation of post-embryonic development	IEP	HCCA
BP	GO:0048867	stem cell fate determination	IEP	HCCA
BP	GO:0051093	negative regulation of developmental process	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051170	import into nucleus	IEP	HCCA
BP	GO:0051241	negative regulation of multicellular organismal process	IEP	HCCA
BP	GO:0051273	beta-glucan metabolic process	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
BP	GO:0052541	plant-type cell wall cellulose metabolic process	IEP	HCCA
BP	GO:0052546	cell wall pectin metabolic process	IEP	HCCA
BP	GO:0055065	metal ion homeostasis	IEP	HCCA
BP	GO:0055082	cellular chemical homeostasis	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
BP	GO:0070589	cellular component macromolecule biosynthetic process	IEP	HCCA
BP	GO:0070592	cell wall polysaccharide biosynthetic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0098771	inorganic ion homeostasis	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA
BP	GO:2000242	negative regulation of reproductive process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014720	dsRBD_dom	658	720
IPR004274	FCP1_dom	246	360

External Links

No external refs found!

AT5G01270 (CPL2, ATCPL2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation