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  5. AT4G39756

AT4G39756


Description : Galactose oxidase/kelch repeat superfamily protein


Gene families : OG0005233 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G39756
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT2G45406 No alias Galactose oxidase/kelch repeat superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G43710 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G11750 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G19250 No alias Galactose oxidase/kelch repeat superfamily protein 0.12 OrthoFinder output from all 47 species
AT4G19330 No alias Galactose oxidase/kelch repeat superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G33900 No alias Galactose oxidase/kelch repeat superfamily protein 0.08 OrthoFinder output from all 47 species
AT4G39290 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G39590 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G39760 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G03010 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G38670 No alias Galactose oxidase/kelch repeat superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G39560 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G48980 No alias Galactose oxidase/kelch repeat superfamily protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006869 lipid transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 18 63
IPR006652 Kelch_1 170 212
No external refs found!