AT4G39720

Description : VQ motif-containing protein

Gene families : OG0000491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G39720
Cluster	HCCA: Cluster_57

Target	Alias	Description	ECC score	Gene Family Method
AT4G20000	No alias	VQ motif-containing protein	0.06	OrthoFinder output from all 47 species
AT5G65170	No alias	VQ motif-containing protein	0.03	OrthoFinder output from all 47 species
Aop_g31657	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g65972	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.16G036400.1	Ceric.16G036400	not classified & original description: pacid=50589400...	0.03	OrthoFinder output from all 47 species
Dac_g09919	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g17707	CAMBP25, ATCAMBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g04684	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01005871001	No alias	No description available	0.03	OrthoFinder output from all 47 species
Gb_21923	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g43140.1	LOC_Os07g43140	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g57121	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10433847g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_77606g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Msp_g48205	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g14853	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g24868	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g20261	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011274	No alias	not classified & original description: CDS=1-804	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g021030	No alias	not classified & original description: CDS=1-1164	0.05	OrthoFinder output from all 47 species
Solyc04g073950.2.1	Solyc04g073950	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Spa_g08343	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g51416	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g54699	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g56675	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g16817	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e013751_P001	Zm00001e013751	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010087	phloem or xylem histogenesis	None	Extended
BP	GO:0010089	xylem development	RCA	Interproscan
BP	GO:0032502	developmental process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	RCA	Interproscan
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0009692	ethylene metabolic process	IEP	HCCA
BP	GO:0009693	ethylene biosynthetic process	IEP	HCCA
BP	GO:0043449	cellular alkene metabolic process	IEP	HCCA
BP	GO:0043450	alkene biosynthetic process	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:0120254	olefinic compound metabolic process	IEP	HCCA
BP	GO:0120255	olefinic compound biosynthetic process	IEP	HCCA
BP	GO:1900673	olefin metabolic process	IEP	HCCA
BP	GO:1900674	olefin biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008889	VQ	123	150

External Links

No external refs found!

AT4G39720

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation