Gb_39862


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 244.0)


Gene families : OG_01_0001636 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001636_tree ,
OG_02_0001022 (LandPlants) Phylogenetic Tree(s): OG_02_0001022_tree ,
OG_03_0000515 (SeedPlants) Phylogenetic Tree(s): OG_03_0000515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_39862
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Gb_01199 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.16 Archaeplastida
Gb_01558 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_01732 No alias no hits & (original description: none) 0.12 Archaeplastida
Gb_05178 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_06493 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.04 Archaeplastida
Gb_06982 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_07097 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_14007 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 Archaeplastida
Gb_15515 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_17944 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_18111 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_19470 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_19496 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_20099 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 Archaeplastida
Gb_24913 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_26216 No alias no hits & (original description: none) 0.1 Archaeplastida
Gb_26792 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_29909 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_33437 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.13 Archaeplastida
Gb_38173 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 Archaeplastida
Gb_40231 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_01199 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.19 LandPlants
Gb_01558 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 LandPlants
Gb_01732 No alias no hits & (original description: none) 0.12 LandPlants
Gb_06493 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 LandPlants
Gb_06982 No alias no hits & (original description: none) 0.03 LandPlants
Gb_07097 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 LandPlants
Gb_14007 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 LandPlants
Gb_15515 No alias no hits & (original description: none) 0.1 LandPlants
Gb_17944 No alias no hits & (original description: none) 0.05 LandPlants
Gb_19470 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 LandPlants
Gb_19496 No alias no hits & (original description: none) 0.05 LandPlants
Gb_20099 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 LandPlants
Gb_24913 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 LandPlants
Gb_26216 No alias no hits & (original description: none) 0.1 LandPlants
Gb_26792 No alias no hits & (original description: none) 0.07 LandPlants
Gb_28029 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 LandPlants
Gb_29909 No alias no hits & (original description: none) 0.02 LandPlants
Gb_33437 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.13 LandPlants
Gb_38173 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 LandPlants
Gb_40231 No alias no hits & (original description: none) 0.07 LandPlants
Gb_01199 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.19 SeedPlants
Gb_01558 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 SeedPlants
Gb_01732 No alias no hits & (original description: none) 0.12 SeedPlants
Gb_06493 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 SeedPlants
Gb_06982 No alias no hits & (original description: none) 0.03 SeedPlants
Gb_07097 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 SeedPlants
Gb_14007 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.05 SeedPlants
Gb_15515 No alias no hits & (original description: none) 0.1 SeedPlants
Gb_17944 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_19470 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 SeedPlants
Gb_19496 No alias no hits & (original description: none) 0.05 SeedPlants
Gb_19991 No alias no hits & (original description: none) 0.03 SeedPlants
Gb_20099 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.02 SeedPlants
Gb_24913 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.04 SeedPlants
Gb_26216 No alias no hits & (original description: none) 0.1 SeedPlants
Gb_26792 No alias no hits & (original description: none) 0.07 SeedPlants
Gb_28029 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 SeedPlants
Gb_29909 No alias no hits & (original description: none) 0.02 SeedPlants
Gb_33437 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.16 SeedPlants
Gb_38173 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.11 SeedPlants
Gb_40231 No alias no hits & (original description: none) 0.07 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!