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  5. AT4G38500

AT4G38500


Description : Protein of unknown function (DUF616)


Gene families : OG0007860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007860_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38500
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Cba_g18049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
MF GO:0016757 glycosyltransferase activity ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005354 galactose transmembrane transporter activity IEP HCCA
CC GO:0005635 nuclear envelope IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007160 cell-matrix adhesion IEP HCCA
CC GO:0008305 integrin complex IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0008805 carbon-monoxide oxygenase activity IEP HCCA
BP GO:0009749 response to glucose IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0015145 monosaccharide transmembrane transporter activity IEP HCCA
MF GO:0015149 hexose transmembrane transporter activity IEP HCCA
MF GO:0016622 oxidoreductase activity, acting on the aldehyde or oxo group of donors, cytochrome as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0031048 RNA-mediated heterochromatin formation IEP HCCA
BP GO:0031507 heterochromatin formation IEP HCCA
BP GO:0031589 cell-substrate adhesion IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0040029 epigenetic regulation of gene expression IEP HCCA
CC GO:0043235 receptor complex IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0045814 negative regulation of gene expression, epigenetic IEP HCCA
BP GO:0048868 pollen tube development IEP HCCA
MF GO:0051119 sugar transmembrane transporter activity IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0070828 heterochromatin organization IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0098636 protein complex involved in cell adhesion IEP HCCA
CC GO:0098802 plasma membrane signaling receptor complex IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR006852 TOD1/MUCI70 139 443
No external refs found!