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AT4G38390 (RHS17)


Aliases : RHS17

Description : root hair specific 17


Gene families : OG0000732 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000732_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G38390
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00204610 evm_27.TU.AmTr_v1... O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G44500 No alias O-fucosyltransferase family protein 0.04 OrthoFinder output from all 47 species
Dcu_g24106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01032027001 No alias O-fucosyltransferase 20 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os04g47520.1 LOC_Os04g47520 O-fucosyltransferase 6 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g01880 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007248_P001 Zm00001e007248 O-fucosyltransferase 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0016757 glycosyltransferase activity ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004108 citrate (Si)-synthase activity IEP HCCA
MF GO:0004484 mRNA guanylyltransferase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
BP GO:0008284 positive regulation of cell population proliferation IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
BP GO:0010214 seed coat development IEP HCCA
BP GO:0010222 stem vascular tissue pattern formation IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
MF GO:0036440 citrate synthase activity IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 126 443
No external refs found!