AT4G37220

Description : Cold acclimation protein WCOR413 family

Gene families : OG0003882 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003882_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37220
Cluster	HCCA: Cluster_22

Target	Alias	Description	ECC score	Gene Family Method
Ala_g23626	ATCOR413-PM2, COR413-PM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07895	ATCOR413-PM2, COR413-PM2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g00273	ATCOR413-PM2, COR413-PM2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g17106	ATCOR413-PM2, COR413-PM2	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009743	response to carbohydrate	None	Extended
BP	GO:0009744	response to sucrose	IEP	Interproscan
BP	GO:0009744	response to sucrose	RCA	Interproscan
BP	GO:0009746	response to hexose	None	Extended
BP	GO:0009749	response to glucose	IEP	Interproscan
BP	GO:0009750	response to fructose	IEP	Interproscan
BP	GO:0009750	response to fructose	RCA	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0034284	response to monosaccharide	None	Extended
BP	GO:0034285	response to disaccharide	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0002832	negative regulation of response to biotic stimulus	IEP	HCCA
MF	GO:0005372	water transmembrane transporter activity	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006833	water transport	IEP	HCCA
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0008453	alanine-glyoxylate transaminase activity	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
BP	GO:0009061	anaerobic respiration	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009894	regulation of catabolic process	IEP	HCCA
BP	GO:0009896	positive regulation of catabolic process	IEP	HCCA
BP	GO:0010817	regulation of hormone levels	IEP	HCCA
MF	GO:0015250	water channel activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0030104	water homeostasis	IEP	HCCA
BP	GO:0030162	regulation of proteolysis	IEP	HCCA
BP	GO:0031329	regulation of cellular catabolic process	IEP	HCCA
BP	GO:0031331	positive regulation of cellular catabolic process	IEP	HCCA
BP	GO:0032102	negative regulation of response to external stimulus	IEP	HCCA
BP	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0042044	fluid transport	IEP	HCCA
BP	GO:0042176	regulation of protein catabolic process	IEP	HCCA
BP	GO:0042744	hydrogen peroxide catabolic process	IEP	HCCA
CC	GO:0043674	columella	IEP	HCCA
BP	GO:0045732	positive regulation of protein catabolic process	IEP	HCCA
BP	GO:0045862	positive regulation of proteolysis	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:0061136	regulation of proteasomal protein catabolic process	IEP	HCCA
BP	GO:0065008	regulation of biological quality	IEP	HCCA
BP	GO:0080170	hydrogen peroxide transmembrane transport	IEP	HCCA
BP	GO:1900424	regulation of defense response to bacterium	IEP	HCCA
BP	GO:1900425	negative regulation of defense response to bacterium	IEP	HCCA
BP	GO:1901483	regulation of transcription factor catabolic process	IEP	HCCA
BP	GO:1901485	positive regulation of transcription factor catabolic process	IEP	HCCA
BP	GO:1901800	positive regulation of proteasomal protein catabolic process	IEP	HCCA
BP	GO:1903050	regulation of proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:1903052	positive regulation of proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:2000058	regulation of ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008892	COR413	9	189

External Links

No external refs found!

AT4G37220

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation