AT4G37200 (HCF164)

Aliases : HCF164

Description : Thioredoxin superfamily protein

Gene families : OG0006010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006010_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G37200

Target	Alias	Description	ECC score	Gene Family Method
Ala_g01048	HCF164	protein involved in cytochrome b6/f complex assembly...	0.03	OrthoFinder output from all 47 species
Als_g11520	HCF164	protein involved in cytochrome b6/f complex assembly...	0.04	OrthoFinder output from all 47 species
Azfi_s0092.g043076	HCF164	protein involved in cytochrome b6/f complex assembly...	0.04	OrthoFinder output from all 47 species
Dac_g03170	HCF164	protein involved in cytochrome b6/f complex assembly...	0.03	OrthoFinder output from all 47 species
Dcu_g47105	HCF164	protein involved in cytochrome b6/f complex assembly...	0.02	OrthoFinder output from all 47 species
Dde_g01274	HCF164	protein involved in cytochrome b6/f complex assembly...	0.04	OrthoFinder output from all 47 species
Ehy_g06408	HCF164	protein involved in cytochrome b6/f complex assembly...	0.02	OrthoFinder output from all 47 species
Gb_14739	HCF164	HCF164 protein involved in cytochrome b6/f complex assembly	0.02	OrthoFinder output from all 47 species
LOC_Os03g55820.1	HCF164, LOC_Os03g55820	HCF164 protein involved in cytochrome b6/f complex assembly	0.05	OrthoFinder output from all 47 species
Len_g01077	HCF164	protein involved in cytochrome b6/f complex assembly...	0.03	OrthoFinder output from all 47 species
Lfl_g02690	HCF164	protein involved in cytochrome b6/f complex assembly...	0.02	OrthoFinder output from all 47 species
Nbi_g12738	HCF164	protein involved in cytochrome b6/f complex assembly...	0.02	OrthoFinder output from all 47 species
Pir_g14034	HCF164	protein involved in cytochrome b6/f complex assembly...	0.04	OrthoFinder output from all 47 species
Sam_g28646	No alias	protein involved in cytochrome b6/f complex assembly...	0.04	OrthoFinder output from all 47 species
Solyc07g064940.3.1	HCF164, Solyc07g064940	HCF164 protein involved in cytochrome b6/f complex assembly	0.03	OrthoFinder output from all 47 species
Zm00001e011960_P001	HCF164, Zm00001e011960	HCF164 protein involved in cytochrome b6/f complex assembly	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009534	chloroplast thylakoid	IDA	Interproscan
CC	GO:0009535	chloroplast thylakoid membrane	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0009579	thylakoid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010190	cytochrome b6f complex assembly	IMP	Interproscan
CC	GO:0016020	membrane	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016667	oxidoreductase activity, acting on a sulfur group of donors	None	Extended
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IDA	Interproscan
BP	GO:0017004	cytochrome complex assembly	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	RCA	Interproscan
CC	GO:0019867	outer membrane	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031968	organelle outer membrane	None	Extended
CC	GO:0031976	plastid thylakoid	None	Extended
CC	GO:0031977	thylakoid lumen	IDA	Interproscan
CC	GO:0034357	photosynthetic membrane	None	Extended
CC	GO:0042170	plastid membrane	None	Extended
CC	GO:0042651	thylakoid membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
CC	GO:0055035	plastid thylakoid membrane	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006629	lipid metabolic process	IEP	HCCA
BP	GO:0006793	phosphorus metabolic process	IEP	HCCA
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	IEP	HCCA
CC	GO:0009526	plastid envelope	IEP	HCCA
CC	GO:0009528	plastid inner membrane	IEP	HCCA
CC	GO:0009706	chloroplast inner membrane	IEP	HCCA
CC	GO:0009941	chloroplast envelope	IEP	HCCA
BP	GO:0010155	regulation of proton transport	IEP	HCCA
BP	GO:0016108	tetraterpenoid metabolic process	IEP	HCCA
BP	GO:0016109	tetraterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016114	terpenoid biosynthetic process	IEP	HCCA
BP	GO:0016116	carotenoid metabolic process	IEP	HCCA
BP	GO:0016117	carotenoid biosynthetic process	IEP	HCCA
BP	GO:0016119	carotene metabolic process	IEP	HCCA
BP	GO:0016120	carotene biosynthetic process	IEP	HCCA
MF	GO:0016166	phytoene dehydrogenase activity	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	IEP	HCCA
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	IEP	HCCA
CC	GO:0019866	organelle inner membrane	IEP	HCCA
CC	GO:0031967	organelle envelope	IEP	HCCA
CC	GO:0031969	chloroplast membrane	IEP	HCCA
CC	GO:0031975	envelope	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0034762	regulation of transmembrane transport	IEP	HCCA
BP	GO:0034765	regulation of monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0042214	terpene metabolic process	IEP	HCCA
BP	GO:0043269	regulation of monoatomic ion transport	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0045036	protein targeting to chloroplast	IEP	HCCA
BP	GO:0046148	pigment biosynthetic process	IEP	HCCA
BP	GO:0046246	terpene biosynthetic process	IEP	HCCA
BP	GO:0046490	isopentenyl diphosphate metabolic process	IEP	HCCA
BP	GO:0046777	protein autophosphorylation	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
BP	GO:0072596	establishment of protein localization to chloroplast	IEP	HCCA
BP	GO:0072598	protein localization to chloroplast	IEP	HCCA
BP	GO:0120251	hydrocarbon biosynthetic process	IEP	HCCA
BP	GO:0120252	hydrocarbon metabolic process	IEP	HCCA
BP	GO:1904062	regulation of monoatomic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013766	Thioredoxin_domain	131	225

External Links

No external refs found!

AT4G37200 (HCF164)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation