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AT4G36980


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Splicing factor, suppressor of white apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479 proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa - 5155; Fungi - 712; Plants - 341; Viruses - 39; Other Eukaryotes - 1336 (source: NCBI BLink).


Gene families : OG0005304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G36980

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00165720 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g054703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.10G057000.1 Ceric.10G057000 not classified & original description: pacid=50611979... 0.04 OrthoFinder output from all 47 species
Cre12.g498350 No alias No description available 0.04 OrthoFinder output from all 47 species
Dac_g32139 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g11070 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01022130001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_10092 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g10248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428744g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g03140.1 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc02g090850.3.1 Solyc02g090850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e001915_P001 Zm00001e001915 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 41 176
No external refs found!