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AT4G36860


Description : LIM domain-containing protein


Gene families : OG0000918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G36860
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
Aob_g08893 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g69358 No alias ubiquitin-dependent protease *(DA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G042400.1 Ceric.11G042400 ubiquitin-dependent protease *(DA1) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016461001 DAR2 Protein DA1-related 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Zm00001e024222_P001 DAR2, Zm00001e024222 ubiquitin receptor regulatory protein (DA1) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0007049 cell cycle IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
BP GO:0140352 export from cell IEP HCCA
InterPro domains Description Start Stop
IPR001781 Znf_LIM 190 245
IPR022087 DA1-like_dom 339 549
No external refs found!