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AT4G35840


Description : RING/U-box superfamily protein


Gene families : OG0001320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001320_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G35840
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Adi_g059048 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ala_g15552 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01005189001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os07g29600.1 NIP2, LOC_Os07g29600 NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g43670.1 LOC_Os08g43670 NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g37050.1 NIP2, LOC_Os09g37050 NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os10g39770.1 LOC_Os10g39770 NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g18758 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
MA_119038g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_816764g0010 No alias NEP1-interacting protein-like 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g56127 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015826 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Solyc02g083400.3.1 NIP2, Solyc02g083400 NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g02435 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g03831 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010150 leaf senescence IEP HCCA
MF GO:0010178 IAA-amino acid conjugate hydrolase activity IEP HCCA
MF GO:0010210 IAA-Phe conjugate hydrolase activity IEP HCCA
MF GO:0010211 IAA-Leu conjugate hydrolase activity IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0010334 sesquiterpene synthase activity IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
MF GO:0016744 transketolase or transaldolase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0034768 (E)-beta-ocimene synthase activity IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
BP GO:0046482 para-aminobenzoic acid metabolic process IEP HCCA
BP GO:0046688 response to copper ion IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
MF GO:0050551 myrcene synthase activity IEP HCCA
BP GO:0051094 positive regulation of developmental process IEP HCCA
BP GO:0051240 positive regulation of multicellular organismal process IEP HCCA
MF GO:0052578 alpha-farnesene synthase activity IEP HCCA
BP GO:0090693 plant organ senescence IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 189 233
IPR027367 Gly-zipper_YMGG 50 86
No external refs found!