AT4G35350 (XCP1)

Aliases : XCP1

Description : xylem cysteine peptidase 1

Gene families : OG0000056 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G35350
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00021p00031000	XBCP3,...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s00022p00165270	XCP1,...	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
AMTR_s00022p00166050	XCP1,...	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
AMTR_s00061p00214890	SAG12,...	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
AMTR_s00061p00215070	SAG12,...	Protein degradation.peptidase families.cysteine-type...	0.04	OrthoFinder output from all 47 species
AMTR_s00061p00215230	SAG12,...	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00215400	SAG12,...	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00215530	SAG12,...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s00061p00215790	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s00374p00013370	evm_27.TU.AmTr_v1...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AMTR_s01332p00008900	SAG12,...	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.03	OrthoFinder output from all 47 species
AT1G29090	No alias	Cysteine proteinases superfamily protein	0.03	OrthoFinder output from all 47 species
AT2G22160	No alias	Cysteine proteinases superfamily protein	0.01	OrthoFinder output from all 47 species
AT3G48340	No alias	Cysteine proteinases superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G11320	No alias	Papain family cysteine protease	0.03	OrthoFinder output from all 47 species
AT5G45890	SAG12	senescence-associated gene 12	0.04	OrthoFinder output from all 47 species
Adi_g010225	XCP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Adi_g024465	XBCP3	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Adi_g082068	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aev_g28599	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aev_g33701	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ala_g10830	XCP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Als_g01794	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Als_g02923	XCP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Als_g41015	XBCP3	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Als_g50691	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aob_g08245	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aop_g13723	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene04464.t1	XCP1, Aspi01Gene04464	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.05	OrthoFinder output from all 47 species
Cba_g17285	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ceric.39G014000.1	XCP2, Ceric.39G014000	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ceric.39G014200.1	XCP2, Ceric.39G014200	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Dac_g20224	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Dac_g39707	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ehy_g10812	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
GSVIVT01009796001	XBCP3	Probable cysteine protease RD21B OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01013420001	XCP1	Protein degradation.peptidase families.cysteine-type...	0.03	OrthoFinder output from all 47 species
GSVIVT01020657001	No alias	Probable cysteine protease RD21B OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01021223001	XBCP3	Probable cysteine protease RD21B OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
GSVIVT01023863001	XCP1	Protein degradation.peptidase families.cysteine-type...	0.05	OrthoFinder output from all 47 species
Gb_10444	No alias	protease (Papain)	0.03	OrthoFinder output from all 47 species
Gb_19399	No alias	Prgrammed Cell Death cysteine protease (XCP)	0.04	OrthoFinder output from all 47 species
Gb_24406	No alias	protease (Papain)	0.03	OrthoFinder output from all 47 species
LOC_Os01g73980.1	XCP2, LOC_Os01g73980	protease (Papain). Prgrammed Cell Death cysteine protease (XCP)	0.05	OrthoFinder output from all 47 species
LOC_Os04g13140.1	SAG12, LOC_Os04g13140	protease (Papain)	0.02	OrthoFinder output from all 47 species
LOC_Os04g55650.1	LOC_Os04g55650	Oryzain alpha chain OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os05g01810.1	XCP2, LOC_Os05g01810	protease (Papain). Prgrammed Cell Death cysteine protease (XCP)	0.07	OrthoFinder output from all 47 species
LOC_Os08g44270.1	LOC_Os08g44270	protease (Papain)	0.05	OrthoFinder output from all 47 species
LOC_Os09g32230.1	SAG12, LOC_Os09g32230	Senescence-specific cysteine protease SAG12...	0.03	OrthoFinder output from all 47 species
LOC_Os09g38920.1	SAG12, LOC_Os09g38920	Senescence-specific cysteine protease SAG12...	0.05	OrthoFinder output from all 47 species
Len_g09449	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
MA_10429635g0010	XCP1	Cysteine protease XCP1 OS=Arabidopsis thaliana...	0.04	OrthoFinder output from all 47 species
Mp4g08490.1	RD21, RD21A	Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase...	0.02	OrthoFinder output from all 47 species
Mp8g12950.1	No alias	Cysteine proteinase RD21A OS=Arabidopsis thaliana...	0.02	OrthoFinder output from all 47 species
Msp_g12514	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Nbi_g18504	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Nbi_g32336	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ore_g05719	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ore_g22000	XCP2	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Ore_g33814	XBCP3	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ppi_g06682	SAG12	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Ppi_g32506	XCP1	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s2981.g028542	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.03	OrthoFinder output from all 47 species
Sam_g09857	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Sam_g34632	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Solyc01g107760.4.1	Solyc01g107760	Probable cysteine protease RD21B OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Solyc02g077040.4.1	Solyc02g077040	Senescence-specific cysteine protease SAG12...	0.03	OrthoFinder output from all 47 species
Solyc04g082710.4.1	XCP1, Solyc04g082710	protease (Papain). Prgrammed Cell Death cysteine protease (XCP)	0.07	OrthoFinder output from all 47 species
Solyc12g094700.3.1	XCP1, Solyc12g094700	protease (Papain). Prgrammed Cell Death cysteine protease (XCP)	0.06	OrthoFinder output from all 47 species
Spa_g07399	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Spa_g26710	No alias	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Spa_g39942	RD21, RD21A	EC_3.4 hydrolase acting on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Tin_g12119	XBCP3	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Tin_g13782	XCP1	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Tin_g19968	RD21, RD21A	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Tin_g28626	XCP2	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.04	OrthoFinder output from all 47 species
Tin_g37188	No alias	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Tin_g38331	No alias	EC_3.4 hydrolase acTing on peptide bond (peptidase) &...	0.02	OrthoFinder output from all 47 species
Zm00001e028260_P001	XCP2, Zm00001e028260	Cysteine protease XCP2 OS=Arabidopsis thaliana...	0.06	OrthoFinder output from all 47 species
Zm00001e029667_P001	XCP2, Zm00001e029667	protease (Papain). Prgrammed Cell Death cysteine protease (XCP)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
CC	GO:0000325	plant-type vacuole	IDA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005773	vacuole	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006508	proteolysis	ISS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	ISS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0010623	programmed cell death involved in cell development	IMP	Interproscan
BP	GO:0012501	programmed cell death	None	Extended
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0048869	cellular developmental process	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
MF	GO:0005507	copper ion binding	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
MF	GO:0008131	primary amine oxidase activity	IEP	HCCA
BP	GO:0009741	response to brassinosteroid	IEP	HCCA
BP	GO:0009832	plant-type cell wall biogenesis	IEP	HCCA
BP	GO:0009834	plant-type secondary cell wall biogenesis	IEP	HCCA
BP	GO:0009888	tissue development	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010014	meristem initiation	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
BP	GO:0010089	xylem development	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0014070	response to organic cyclic compound	IEP	HCCA
MF	GO:0016638	oxidoreductase activity, acting on the CH-NH2 group of donors	IEP	HCCA
MF	GO:0016641	oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044087	regulation of cellular component biogenesis	IEP	HCCA
CC	GO:0045298	tubulin complex	IEP	HCCA
BP	GO:0048856	anatomical structure development	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903338	regulation of cell wall organization or biogenesis	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2000652	regulation of secondary cell wall biogenesis	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000668	Peptidase_C1A_C	137	352
IPR013201	Prot_inhib_I29	51	107

External Links

No external refs found!

AT4G35350 (XCP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation