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  5. AT4G34960

AT4G34960


Description : Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G34960
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Adi_g016344 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g026560 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g060435 ROC4 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08769 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28570 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g23052 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06151 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17479 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.21G028600.1 ROC2, Ceric.21G028600 EC_5.2 cis-trans-isomerase & original description:... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.29 No alias Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001636.9 CYP5, ATCYP5, CYP19-4 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Cre01.g002300 No alias Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Dac_g00525 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31037 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g02890.1 LOC_Os02g02890 protein folding catalyst 0.02 OrthoFinder output from all 47 species
LOC_Os06g49480.1 ROC7, LOC_Os06g49480 protein folding catalyst 0.05 OrthoFinder output from all 47 species
LOC_Os09g36670.1 LOC_Os09g36670 protein folding catalyst 0.02 OrthoFinder output from all 47 species
Len_g08391 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g00667 CYP5, ATCYP5, CYP19-4 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g21570.1 CYP5, ATCYP5, CYP19-4 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Pir_g01208 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g09201 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60878 No alias EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_32280V3.1 ROC3, Pp3c1_32280 Cyclophilin-like peptidyl-prolyl cis-trans isomerase... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013401 ROC7 EC_5.2 cis-trans-isomerase & original description: CDS=89-709 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021249 No alias EC_5.2 cis-trans-isomerase & original description: CDS=10-2358 0.03 OrthoFinder output from all 47 species
Sam_g38062 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo111263 ROC7 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Smo74823 No alias Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Solyc06g076970.3.1 ROC7, Solyc06g076970 protein folding catalyst 0.03 OrthoFinder output from all 47 species
Spa_g00177 ROC2 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10915 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19009 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02390 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05019 No alias EC_5.2 cis-trans-isomerase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013222_P003 CYP5, ATCYP5,... protein folding catalyst 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISS Interproscan
CC GO:0005768 endosome IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005802 trans-Golgi network IDA Interproscan
BP GO:0006457 protein folding ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
CC GO:0000932 P-body IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
CC GO:0005732 sno(s)RNA-containing ribonucleoprotein complex IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006007 glucose catabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006446 regulation of translational initiation IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008794 arsenate reductase (glutaredoxin) activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019320 hexose catabolic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
MF GO:0030611 arsenate reductase activity IEP HCCA
MF GO:0030613 oxidoreductase activity, acting on phosphorus or arsenic in donors IEP HCCA
MF GO:0030614 oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
CC GO:0035770 ribonucleoprotein granule IEP HCCA
CC GO:0036464 cytoplasmic ribonucleoprotein granule IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046365 monosaccharide catabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046686 response to cadmium ion IEP HCCA
BP GO:0047484 regulation of response to osmotic stress IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0055074 calcium ion homeostasis IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 53 211
No external refs found!