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  5. AT4G31980

AT4G31980


Description : unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF247, plant (InterPro:IPR004158), Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: Plant protein of unknown function (DUF247) (TAIR:AT5G11290.1); Has 1967 Blast hits to 1844 proteins in 183 species: Archae - 0; Bacteria - 6; Metazoa - 223; Fungi - 83; Plants - 1477; Viruses - 0; Other Eukaryotes - 178 (source: NCBI BLink).


Gene families : OG0000125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G31980

Target Alias Description ECC score Gene Family Method Actions
Aob_g30226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13157.t1 Aspi01Gene13157 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29768.t1 Aspi01Gene29768 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G043000.1 Ceric.08G043000 not classified & original description: pacid=50637921... 0.02 OrthoFinder output from all 47 species
Ceric.08G043100.1 Ceric.08G043100 not classified & original description: pacid=50638846... 0.02 OrthoFinder output from all 47 species
Gb_15961 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os04g42650.1 LOC_Os04g42650 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Lfl_g24925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429513g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Msp_g14823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012180 No alias not classified & original description: CDS=1-1593 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012986 No alias not classified & original description: CDS=1-1557 0.03 OrthoFinder output from all 47 species
Solyc04g008910.3.1 Solyc04g008910 UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009827 plant-type cell wall modification IEP HCCA
BP GO:0009860 pollen tube growth IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015101 organic cation transmembrane transporter activity IEP HCCA
MF GO:0015144 carbohydrate transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
MF GO:0015651 quaternary ammonium group transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0015697 quaternary ammonium group transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
MF GO:0090416 nicotinate transmembrane transporter activity IEP HCCA
MF GO:0090417 N-methylnicotinate transmembrane transporter activity IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:2001142 nicotinate transport IEP HCCA
BP GO:2001143 N-methylnicotinate transport IEP HCCA
InterPro domains Description Start Stop
IPR004158 DUF247_pln 295 668
IPR008580 PPPDE_dom 18 151
No external refs found!