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  5. AT4G31440

AT4G31440


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G24530.1); Has 210 Blast hits to 209 proteins in 55 species: Archae - 0; Bacteria - 72; Metazoa - 2; Fungi - 6; Plants - 128; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).


Gene families : OG0001506 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G31440
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Ala_g02361 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Aspi01Gene34275.t1 Aspi01Gene34275 component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Azfi_s0108.g045237 No alias component *(ADA1) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Cba_g32594 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000704.27 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.01 OrthoFinder output from all 47 species
Lfl_g02173 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Pir_g47730 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Ppi_g01115 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000315 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sam_g18095 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Sam_g19955 No alias component *(ADA1) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005802 trans-Golgi network IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0009225 nucleotide-sugar metabolic process IEP HCCA
BP GO:0009969 xyloglucan biosynthetic process IEP HCCA
BP GO:0010411 xyloglucan metabolic process IEP HCCA
BP GO:0010540 basipetal auxin transport IEP HCCA
MF GO:0016763 pentosyltransferase activity IEP HCCA
MF GO:0022821 solute:potassium antiporter activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0031401 positive regulation of protein modification process IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
MF GO:0033843 xyloglucan 6-xylosyltransferase activity IEP HCCA
MF GO:0035252 UDP-xylosyltransferase activity IEP HCCA
MF GO:0042285 xylosyltransferase activity IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0051247 positive regulation of protein metabolic process IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0090333 regulation of stomatal closure IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
BP GO:2000539 regulation of protein geranylgeranylation IEP HCCA
BP GO:2000541 positive regulation of protein geranylgeranylation IEP HCCA
InterPro domains Description Start Stop
IPR024738 Hfi1/Tada1 5 289
No external refs found!