Aliases : Os01g0205200
Description : No description available
Gene families : OG_01_0000001 (Gene family) Phylogenetic Tree(s): OG0000001_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR network (cutoff 100): LOC_Os01g10800 | |
Cluster | HCCA cluster: Cluster_170 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G11290 | CRR22 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Gene family | |
AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Gene family | |
AT3G57430 | OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Gene family | |
AT3G63370 | OTP86 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Gene family | |
GSVIVT01009789001 | No alias | No description available | 0.02 | Gene family | |
GSVIVT01009974001 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
GSVIVT01012461001 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
GSVIVT01031251001 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
GSVIVT01033190001 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
LOC_Os10g39460 | Os10g0540100 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_100287g0010 | No alias | No description available | 0.01 | Gene family | |
MA_10426444g0010 | No alias | No description available | 0.02 | Gene family | |
MA_10433543g0010 | No alias | No description available | 0.01 | Gene family | |
MA_123466g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.04 | Gene family | |
MA_135075g0020 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.05 | Gene family | |
MA_20622g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_43615g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.05 | Gene family | |
MA_4438g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.01 | Gene family | |
MA_80970g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.01 | Gene family | |
MA_81514g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
MA_82569g0020 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
MA_89214g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_94165g0010 | No alias | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
MA_953793g0020 | No alias | No description available | 0.04 | Gene family | |
Smo105356 | PACid_15414251 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Smo106861 | PACid_15420913 | No description available | 0.01 | Gene family | |
Smo47998 | PACid_15423210 | No description available | 0.01 | Gene family | |
Smo84657 | PACid_15418630 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Smo90123 | PACid_15410274 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Smo98955 | PACid_15417483 | No description available | 0.03 | Gene family | |
Solyc02g081900.3.1 | Solyc02g081900.3 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.04 | Gene family | |
Solyc10g007940.1.1 | Solyc10g007940.1 | No description available | 0.01 | Gene family | |
Solyc11g066920.1.1 | Solyc11g066920.1 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.02 | Gene family | |
Zm00001d027555 | GRMZM2G176523 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family | |
Zm00001d031535 | GRMZM2G076257 | No description available | 0.06 | Gene family | |
Zm00001d032185 | GRMZM2G161368 | 35.1.5 not assigned.no ontology.pentatricopeptide (PPR)... | 0.03 | Gene family |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | InterProScan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 949 | 1072 |
IPR002885 | Pentatricopeptide_repeat | 674 | 717 |
IPR002885 | Pentatricopeptide_repeat | 372 | 417 |
IPR002885 | Pentatricopeptide_repeat | 573 | 621 |
IPR002885 | Pentatricopeptide_repeat | 774 | 822 |
IPR002885 | Pentatricopeptide_repeat | 235 | 260 |
IPR002885 | Pentatricopeptide_repeat | 263 | 293 |
IPR002885 | Pentatricopeptide_repeat | 163 | 192 |
IPR002885 | Pentatricopeptide_repeat | 850 | 873 |
IPR002885 | Pentatricopeptide_repeat | 649 | 671 |
IPR002885 | Pentatricopeptide_repeat | 475 | 504 |
IPR002885 | Pentatricopeptide_repeat | 445 | 473 |
IPR002885 | Pentatricopeptide_repeat | 138 | 156 |
No external refs found! |