1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT4G30690

AT4G30690


Description : Translation initiation factor 3 protein


Gene families : OG0001945 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001945_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G30690

Target Alias Description ECC score Gene Family Method Actions
Dac_g05659 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os02g55120.1 LOC_Os02g55120 IF-3 translation initiation factor 0.02 OrthoFinder output from all 47 species
Pir_g43984 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g10213 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Sam_g36798 No alias translation initiation factor *(IF-3) & original... 0.02 OrthoFinder output from all 47 species
Tin_g29773 No alias translation initiation factor *(IF-3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016109_P001 Zm00001e016109 IF-3 translation initiation factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006413 translational initiation ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000373 Group II intron splicing IEP HCCA
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000412 histone peptidyl-prolyl isomerization IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
MF GO:0005527 macrolide binding IEP HCCA
MF GO:0005528 FK506 binding IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0009740 gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
BP GO:0009965 leaf morphogenesis IEP HCCA
BP GO:0010476 gibberellin mediated signaling pathway IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0030154 cell differentiation IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0043085 positive regulation of catalytic activity IEP HCCA
BP GO:0044093 positive regulation of molecular function IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048869 cellular developmental process IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051341 regulation of oxidoreductase activity IEP HCCA
BP GO:0051353 positive regulation of oxidoreductase activity IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:1902551 regulation of catalase activity IEP HCCA
BP GO:1902553 positive regulation of catalase activity IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1905392 plant organ morphogenesis IEP HCCA
BP GO:2000468 regulation of peroxidase activity IEP HCCA
BP GO:2000470 positive regulation of peroxidase activity IEP HCCA
InterPro domains Description Start Stop
IPR019814 Translation_initiation_fac_3_N 90 156
IPR019815 Translation_initiation_fac_3_C 164 247
No external refs found!