AT4G30380

Description : Barwin-related endoglucanase

Gene families : OG0001560 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001560_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G30380
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00152080	evm_27.TU.AmTr_v1...	EG45-like domain containing protein OS=Citrus jambhiri	0.03	OrthoFinder output from all 47 species
Aob_g20707	PNP-A	PNP precursor polypeptide & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.21G070300.1	Ceric.21G070300	not classified & original description: pacid=50603031...	0.05	OrthoFinder output from all 47 species
Sam_g30872	No alias	PNP precursor polypeptide & original description: none	0.02	OrthoFinder output from all 47 species
Solyc07g006390.3.1	Solyc07g006390	Putative EG45-like domain containing protein 1...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0001666	response to hypoxia	None	Extended
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	ISM	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0036293	response to decreased oxygen levels	None	Extended
BP	GO:0036294	cellular response to decreased oxygen levels	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0070482	response to oxygen levels	None	Extended
BP	GO:0070887	cellular response to chemical stimulus	None	Extended
BP	GO:0071453	cellular response to oxygen levels	None	Extended
BP	GO:0071456	cellular response to hypoxia	IEP	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009828	plant-type cell wall loosening	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR009009	RlpA-like_DPBB	46	121

External Links

No external refs found!