Aliases : ATCNGC17, CNGC17
Description : cyclic nucleotide-gated channel 17
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00053p00015490 | ATCNGC1, CNGC1,... | Solute transport.channels.VIC superfamily.cyclic... | 0.04 | OrthoFinder output from all 47 species | |
AT2G46430 | ATCNGC3, CNGC3, CNGC3.C | cyclic nucleotide gated channel 3 | 0.05 | OrthoFinder output from all 47 species | |
AT2G46440 | CNGC11, ATCNGC11 | cyclic nucleotide-gated channels | 0.03 | OrthoFinder output from all 47 species | |
AT3G17700 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-binding transporter 1 | 0.05 | OrthoFinder output from all 47 species | |
AT4G01010 | ATCNGC13, CNGC13 | cyclic nucleotide-gated channel 13 | 0.04 | OrthoFinder output from all 47 species | |
Als_g34084 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g08048 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0301.g063721 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g13367 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.14G091000.1 | CNGC7, ATCNGC7,... | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.37G059700.1 | CNGC15,... | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00021244.33 | ATCNGC9, CNGC9 | Putative cyclic nucleotide-gated ion channel 9... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g02907 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01029404001 | ATCNGC20, CNGC20, CNBT1 | Solute transport.channels.VIC superfamily.cyclic... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01029407001 | ATCNGC20, CNGC20, CNBT1 | Solute transport.channels.VIC superfamily.cyclic... | 0.05 | OrthoFinder output from all 47 species | |
Gb_32552 | CNGC5, ATCNGC5 | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g54760.1 | ATCNGC17,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g10580.1 | ATCNGC20,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Len_g03379 | CNGC5, ATCNGC5 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05634 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g06561 | CNGC5, ATCNGC5 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.04 | OrthoFinder output from all 47 species | |
Msp_g24602 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g03359 | CNGC15, ATCNGC15 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g09435 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g25901 | ATCNGC10, CNGC10, ACBK1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pir_g51567 | CNGC19, ATCNGC19 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g18670 | ATCNGC20, CNGC20, CNBT1 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0074.g017306 | CNGC5, ATCNGC5 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g30209 | No alias | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.05 | OrthoFinder output from all 47 species | |
Solyc02g086990.4.1 | CNGC18,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g050350.2.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Solyc05g050380.4.1 | ATCNGC13,... | cyclic nucleotide-gated cation channel (CNGC) | 0.04 | OrthoFinder output from all 47 species | |
Solyc06g051920.4.1 | ATCNGC1, CNGC1,... | cyclic nucleotide-gated cation channel (CNGC) | 0.06 | OrthoFinder output from all 47 species | |
Solyc07g005590.3.1 | CNGC5, ATCNGC5,... | cyclic nucleotide-gated cation channel (CNGC) | 0.04 | OrthoFinder output from all 47 species | |
Solyc07g006510.3.1 | ATCNGC17,... | cyclic nucleotide-gated cation channel (CNGC) | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g069580.2.1 | CNGC15,... | cyclic nucleotide-gated cation channel (CNGC) | 0.05 | OrthoFinder output from all 47 species | |
Solyc12g010010.2.1 | CNGC5, ATCNGC5,... | cyclic nucleotide-gated cation channel (CNGC) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e011591_P002 | CNGC18,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e034885_P002 | ATCNGC17,... | cyclic nucleotide-gated cation channel (CNGC) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e036286_P001 | ATCNGC17,... | cyclic nucleotide-gated cation channel (CNGC) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005216 | monoatomic ion channel activity | ISS | Interproscan |
MF | GO:0005516 | calmodulin binding | ISS | Interproscan |
CC | GO:0005886 | plasma membrane | ISM | Interproscan |
MF | GO:0030551 | cyclic nucleotide binding | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | HCCA |
MF | GO:0004559 | alpha-mannosidase activity | IEP | HCCA |
MF | GO:0004712 | protein serine/threonine/tyrosine kinase activity | IEP | HCCA |
CC | GO:0005768 | endosome | IEP | HCCA |
CC | GO:0005794 | Golgi apparatus | IEP | HCCA |
CC | GO:0005802 | trans-Golgi network | IEP | HCCA |
BP | GO:0006401 | RNA catabolic process | IEP | HCCA |
BP | GO:0006402 | mRNA catabolic process | IEP | HCCA |
BP | GO:0006491 | N-glycan processing | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0009100 | glycoprotein metabolic process | IEP | HCCA |
BP | GO:0009735 | response to cytokinin | IEP | HCCA |
BP | GO:0010155 | regulation of proton transport | IEP | HCCA |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | HCCA |
MF | GO:0015923 | mannosidase activity | IEP | HCCA |
BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
BP | GO:0030163 | protein catabolic process | IEP | HCCA |
CC | GO:0031410 | cytoplasmic vesicle | IEP | HCCA |
CC | GO:0031982 | vesicle | IEP | HCCA |
CC | GO:0031984 | organelle subcompartment | IEP | HCCA |
BP | GO:0032879 | regulation of localization | IEP | HCCA |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
BP | GO:0034762 | regulation of transmembrane transport | IEP | HCCA |
BP | GO:0034765 | regulation of monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0035966 | response to topologically incorrect protein | IEP | HCCA |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0043248 | proteasome assembly | IEP | HCCA |
BP | GO:0043269 | regulation of monoatomic ion transport | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
BP | GO:0046777 | protein autophosphorylation | IEP | HCCA |
BP | GO:0048364 | root development | IEP | HCCA |
BP | GO:0048767 | root hair elongation | IEP | HCCA |
BP | GO:0051049 | regulation of transport | IEP | HCCA |
BP | GO:0051788 | response to misfolded protein | IEP | HCCA |
CC | GO:0097708 | intracellular vesicle | IEP | HCCA |
CC | GO:0098791 | Golgi apparatus subcompartment | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1904062 | regulation of monoatomic cation transmembrane transport | IEP | HCCA |
No external refs found! |