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AT4G29950


Description : Ypt/Rab-GAP domain of gyp1p superfamily protein


Gene families : OG0001521 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001521_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G29950
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT5G57210 No alias Ypt/Rab-GAP domain of gyp1p superfamily protein 0.02 OrthoFinder output from all 47 species
Aop_g06541 No alias Rab GTPase-activating protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02565.t1 Aspi01Gene02565 Rab GTPase-activating protein & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0235.g026538 No alias Rab GTPase-activating protein & original description:... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
CC GO:0005774 vacuolar membrane IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0007033 vacuole organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009705 plant-type vacuole membrane IEP HCCA
BP GO:0010383 cell wall polysaccharide metabolic process IEP HCCA
BP GO:0010410 hemicellulose metabolic process IEP HCCA
BP GO:0010413 glucuronoxylan metabolic process IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA
BP GO:0045491 xylan metabolic process IEP HCCA
BP GO:0045492 xylan biosynthetic process IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000195 Rab-GTPase-TBC_dom 98 157
IPR000195 Rab-GTPase-TBC_dom 254 354
No external refs found!