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  5. AT4G28940

AT4G28940


Description : Phosphorylase superfamily protein


Gene families : OG0002104 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002104_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28940
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00104440 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AT4G24350 No alias Phosphorylase superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g05256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41703.t1 Aspi01Gene41703 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14092 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g38405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20365 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_35477 No alias Bark storage protein A OS=Populus deltoides... 0.03 OrthoFinder output from all 47 species
Gb_35482 No alias Bark storage protein B OS=Populus deltoides... 0.02 OrthoFinder output from all 47 species
LOC_Os01g12940.1 LOC_Os01g12940 Bark storage protein A OS=Populus deltoides... 0.04 OrthoFinder output from all 47 species
LOC_Os05g13970.1 LOC_Os05g13970 Bark storage protein A OS=Populus deltoides... 0.04 OrthoFinder output from all 47 species
LOC_Os06g02210.1 LOC_Os06g02210 Bark storage protein A OS=Populus deltoides... 0.06 OrthoFinder output from all 47 species
Lfl_g22334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24489 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g27634 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_6189150g0010 No alias Bark storage protein A OS=Populus deltoides... 0.01 OrthoFinder output from all 47 species
Pir_g19666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g05714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc08g066890.4.1 Solyc08g066890 Bark storage protein A OS=Populus deltoides... 0.03 OrthoFinder output from all 47 species
Solyc08g066900.1.1 Solyc08g066900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g007730.2.1 Solyc11g007730 Bark storage protein A OS=Populus deltoides... 0.01 OrthoFinder output from all 47 species
Zm00001e036682_P001 Zm00001e036682 Bark storage protein B OS=Populus deltoides... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006722 triterpenoid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0007154 cell communication IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009991 response to extracellular stimulus IEP HCCA
BP GO:0010035 response to inorganic substance IEP HCCA
BP GO:0010038 response to metal ion IEP HCCA
BP GO:0010043 response to zinc ion IEP HCCA
BP GO:0010106 cellular response to iron ion starvation IEP HCCA
BP GO:0010167 response to nitrate IEP HCCA
CC GO:0010168 ER body IEP HCCA
BP GO:0010345 suberin biosynthetic process IEP HCCA
BP GO:0010683 tricyclic triterpenoid metabolic process IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0015706 nitrate transmembrane transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0018685 alkane 1-monooxygenase activity IEP HCCA
MF GO:0019825 oxygen binding IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0051054 positive regulation of DNA metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051347 positive regulation of transferase activity IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051972 regulation of telomerase activity IEP HCCA
BP GO:0051973 positive regulation of telomerase activity IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0080003 thalianol metabolic process IEP HCCA
MF GO:0080014 thalianol hydroxylase activity IEP HCCA
BP GO:0080119 ER body organization IEP HCCA
BP GO:0080184 response to phenylpropanoid IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098661 inorganic anion transmembrane transport IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:1902025 nitrate import IEP HCCA
BP GO:2000278 regulation of DNA biosynthetic process IEP HCCA
BP GO:2000573 positive regulation of DNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000845 Nucleoside_phosphorylase_d 44 336
No external refs found!