AT4G28840


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20080.1); Has 71 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).


Gene families : OG0013888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013888_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28840

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g13040.1 LOC_Os01g13040 transcriptional repressor (TIE/SPL) 0.02 OrthoFinder output from all 47 species
LOC_Os05g48570.1 LOC_Os05g48570 transcriptional repressor (TIE/SPL) 0.08 OrthoFinder output from all 47 species
Pir_g42839 No alias transcriptional repressor *(TIE/SPL) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g018370.3.1 Solyc07g018370 transcriptional repressor (TIE/SPL) 0.03 OrthoFinder output from all 47 species
Zm00001e020173_P001 Zm00001e020173 transcriptional repressor (TIE/SPL) 0.04 OrthoFinder output from all 47 species
Zm00001e026498_P002 Zm00001e026498 transcriptional repressor (TIE/SPL) 0.02 OrthoFinder output from all 47 species
Zm00001e028063_P001 Zm00001e028063 transcriptional repressor (TIE/SPL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0045892 negative regulation of DNA-templated transcription IDA Interproscan
BP GO:0048366 leaf development IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!