AT4G28270 (ATRMA2, RMA2)

Aliases : ATRMA2, RMA2

Description : RING membrane-anchor 2

Gene families : OG0000266 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000266_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G28270

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00009p00264430	evm_27.TU.AmTr_v1...	Protein degradation.peptide tagging.Ubiquitin...	0.02	OrthoFinder output from all 47 species
AT4G03510	RMA1, ATRMA1	RING membrane-anchor 1	0.03	OrthoFinder output from all 47 species
Adi_g039742	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g101989	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.09G059900.1	Ceric.09G059900	E3 ubiquitin ligase *(RMA/MUSE) & original description:...	0.06	OrthoFinder output from all 47 species
Ceric.10G009900.1	Ceric.10G009900	E3 ubiquitin ligase *(RMA/MUSE) & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g35812	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dac_g35852	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g18993	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.06	OrthoFinder output from all 47 species
LOC_Os02g42690.3	LOC_Os02g42690	RING-HC-class E3 ligase	0.04	OrthoFinder output from all 47 species
Ppi_g62388	No alias	E3 ubiquitin ligase *(RMA/MUSE) & original description: none	0.02	OrthoFinder output from all 47 species
Solyc06g051230.4.1	Solyc06g051230	RING-HC-class E3 ligase	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005783	endoplasmic reticulum	IDA	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005737	cytoplasm	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0016706	2-oxoglutarate-dependent dioxygenase activity	IEP	HCCA
BP	GO:0032879	regulation of localization	IEP	HCCA
BP	GO:0051049	regulation of transport	IEP	HCCA
MF	GO:0051213	dioxygenase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027370	Znf-RING_euk	21	56

External Links

No external refs found!