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  5. AT4G28170

AT4G28170


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11120.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).


Gene families : OG0002532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002532_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G28170
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00259750 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aob_g01861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01006946001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os07g37820.1 LOC_Os07g37820 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Mp2g12290.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g36066 No alias A1-class (Pepsin) protease & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006590.3.1 Solyc03g006590 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e010569_P001 Zm00001e010569 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e019078_P001 Zm00001e019078 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e031716_P001 Zm00001e031716 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001666 response to hypoxia IEP HCCA
MF GO:0004022 alcohol dehydrogenase (NAD+) activity IEP HCCA
BP GO:0006714 sesquiterpenoid metabolic process IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009687 abscisic acid metabolic process IEP HCCA
BP GO:0009688 abscisic acid biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009888 tissue development IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010087 phloem or xylem histogenesis IEP HCCA
BP GO:0010089 xylem development IEP HCCA
BP GO:0010101 post-embryonic root morphogenesis IEP HCCA
BP GO:0010102 lateral root morphogenesis IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
MF GO:0010279 indole-3-acetic acid amido synthetase activity IEP HCCA
MF GO:0010297 heteropolysaccharide binding IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010432 bract development IEP HCCA
MF GO:0010436 carotenoid dioxygenase activity IEP HCCA
BP GO:0010451 floral meristem growth IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
BP GO:0016106 sesquiterpenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016715 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
MF GO:0018455 alcohol dehydrogenase [NAD(P)+] activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0035266 meristem growth IEP HCCA
BP GO:0036293 response to decreased oxygen levels IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043288 apocarotenoid metabolic process IEP HCCA
BP GO:0043289 apocarotenoid biosynthetic process IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
BP GO:0070482 response to oxygen levels IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0071396 cellular response to lipid IEP HCCA
BP GO:0071398 cellular response to fatty acid IEP HCCA
BP GO:0071731 response to nitric oxide IEP HCCA
BP GO:0071732 cellular response to nitric oxide IEP HCCA
BP GO:0099402 plant organ development IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1902170 cellular response to reactive nitrogen species IEP HCCA
BP GO:1902644 tertiary alcohol metabolic process IEP HCCA
BP GO:1902645 tertiary alcohol biosynthetic process IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!